fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G13850 LBD22 LOB domain-containing protein 22 (.1)

>AT3G13850.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 349, 746
XhoI C|TCGAG 483


Click here to view TAIR data

>AT3G13850.1 length:807
ATGCCCTCAG GCAAACCTTC TTCTGTCTTC CCTTTACATC CCAAACCTAC 
50
ACCATTAAAA CCTTCTAGCA GCACCAGCAG CAGCAACAAC AACAGCACAA 
100
ACCAAGCCTG CGCCGCCTGC AAATACCAAC GCAGGAAATG CGCTCCCGAT 
150
TGTCTTCTTG CTCCTTATTT CCCTCACGAC CGTCACCGCC AATTCCTTAA 
200
CGCGCATAAG CTCTTTGGAG TCAGCAACAT CACCAAGATC ATTAAATCCC 
250
TTACCCCTCC AGAGAAAGAC GCAGCTATGC ATACAATCAT GTTTCAGTCC 
300
GATGCTCGTG CCAATGATCC CGTTGATGGA TGCTATGGCA TCATAAAAAA 
350
GCTTCAATAC CAGATCGAAT ACACAAGAAA CGAATTGGAG ATTGTTCTTC 
400
AGCAATTGGC TATGTTCCGT GACCGTGCTC ATCAACATCA TCATCAAGAA 
450
CCGCATATCC AGATGCAAGA ACAAGAGGAT CTCTCGAGTT TTTCGAGTTC 
500
TTGTGATCTA AACAACAACA ATTCGATTCC TTACAATTAC CCTCTGAATC 
550
ACATTCAAGA ACCAAATCAA CAACAATATT GTTCTTCCGG TAATAACTTC 
600
AGTGGGTTAC AAGAAGACAT GTGGTGTCTT CAACTTCAAG ATTCATCAAC 
650
GATAGTGAAT ATGAAGGCTG GTTTCATTGA TGAATGTGAA GACGTAAAGC 
700
CTGTAGAAGA GGTTTCTAGC GAACGACACG AGTTTGAGCC TCATGAAGCT 
750
TTCGTTGAAC AACGGAAACT CGACTTGCCT TCCGCACAAT ACATCATTTC 
800
TTCTTAG
850

>AT3G13850.1 longest ORF length:268
MPSGKPSSVF PLHPKPTPLK PSSSTSSSNN NSTNQACAAC KYQRRKCAPD 
50
CLLAPYFPHD RHRQFLNAHK LFGVSNITKI IKSLTPPEKD AAMHTIMFQS 
100
DARANDPVDG CYGIIKKLQY QIEYTRNELE IVLQQLAMFR DRAHQHHHQE 
150
PHIQMQEQED LSSFSSSCDL NNNNSIPYNY PLNHIQEPNQ QQYCSSGNNF 
200
SGLQEDMWCL QLQDSSTIVN MKAGFIDECE DVKPVEEVSS ERHEFEPHEA 
250
FVEQRKLDLP SAQYIISS
300