|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G13890 | ATMYB26, MS35 | MALE STERILE 35, myb domain protein 26 (.1.2) |
>AT3G13890.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI
| Name | Recognition sequence | Cut positions |
| HindIII | A|AGCTT | 231 |
| NcoI | C|CATGG | 99, 419 |
| NdeI | CA|TATG | 92 |
| SacI | GAGCT|C | 111 |
| SalI | G|TCGAC | 475 |
| StyI | C|C[AT][AT]GG | 99, 419 |
| XbaI | T|CTAGA | 598 |
| XhoI | C|TCGAG | 354 |
Click here to view TAIR data
>AT3G13890.1 length:1104
ATGGGTCATC ACTCATGCTG CAACAAGCAA AAGGTGAAGA GAGGGCTTTG | 50 |
GTCACCTGAA GAAGACGAAA AGCTCATCAA CTACATCAAT TCATATGGCC | 100 |
ATGGATGTTG GAGCTCTGTT CCTAAACATG CAGGCACTTA TACACATATA | 150 |
CATGGGTTTT GTTTGCAGAG ATGTGGAAAG AGTTGTAGAT TAAGATGGAT | 200 |
AAATTATCTA AGACCTGATC TTAAACGTGG AAGCTTCTCT CCTCAAGAAG | 250 |
CTGCTCTTAT CATTGAGCTT CACAGCATTC TTGGTAACAG ATGGGCTCAA | 300 |
ATTGCTAAAC ATCTACCTGG AAGAACAGAT AACGAGGTCA AGAATTTCTG | 350 |
GAACTCGAGC ATTAAAAAGA AGCTCATGTC TCACCATCAT CACGGTCATC | 400 |
ATCATCATCA TCTCTCTTCC ATGGCGAGTT TGCTCACAAA CCTTCCTTAT | 450 |
CACAATGGAT TCAACCCTAC TACAGTCGAC GATGAAAGTT CAAGATTCAT | 500 |
GTCCAATATC ATCACAAACA CTAACCCTAA TTTCATCACT CCAAGCCATC | 550 |
TCTCTCTTCC TTCTCCTCAT GTTATGACCC CATTGATGTT CCCAACCTCT | 600 |
AGAGAAGGAG ATTTCAAGTT TCTAACCACA AACAACCCAA ACCAATCTCA | 650 |
TCACCATGAT AATAACCATT ACAACAACCT CGACATTTTG TCACCCACAC | 700 |
CAACTATAAA CAATCATCAT CAACCTTCAC TTTCTTCTTG TCCTCATGAT | 750 |
AATAATCTCC AATGGCCAGC GTTACCAGAT TTCCCAGCGA GTACCATTTC | 800 |
TGGTTTCCAA GAAACCCTTC AAGATTATGA TGATGCTAAT AAACTCAACG | 850 |
TGTTTGTGAC ACCATTCAAC GATAATGCCA AAAAGTTATT ATGTGGAGAA | 900 |
GTTCTCGAAG GCAAAGTACT ATCTTCCTCC TCACCAATTT CACAAGATCA | 950 |
CGGCCTTTTT CTTCCCACCA CGTACAACTT TCAAATGACT TCTACGAGTG | 1000 |
ATCATCAACA TCATCATCGA GTGGACTCAT ACATCAATCA CATGATCATA | 1050 |
CCATCATCAT CCTCATCGTC GCCAATCTCT TGTGGACAGT ACGTCATAAC | 1100 |
TTAA | 1150 |
>AT3G13890.1 longest ORF length:367
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIN SYGHGCWSSV PKHAGTYTHI | 50 |
HGFCLQRCGK SCRLRWINYL RPDLKRGSFS PQEAALIIEL HSILGNRWAQ | 100 |
IAKHLPGRTD NEVKNFWNSS IKKKLMSHHH HGHHHHHLSS MASLLTNLPY | 150 |
HNGFNPTTVD DESSRFMSNI ITNTNPNFIT PSHLSLPSPH VMTPLMFPTS | 200 |
REGDFKFLTT NNPNQSHHHD NNHYNNLDIL SPTPTINNHH QPSLSSCPHD | 250 |
NNLQWPALPD FPASTISGFQ ETLQDYDDAN KLNVFVTPFN DNAKKLLCGE | 300 |
VLEGKVLSSS SPISQDHGLF LPTTYNFQMT STSDHQHHHR VDSYINHMII | 350 |
PSSSSSSPIS CGQYVIT | 400 |