fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G14020 NF-YA6 "nuclear factor Y, subunit A6", nuclear factor Y, subunit A6 (.1)

>AT3G14020.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 318
HindIII A|AGCTT 120, 574
NheI G|CTAGC 217
StyI C|C[AT][AT]GG 84
XbaI T|CTAGA 475


Click here to view TAIR data

>AT3G14020.1 length:927
ATGCAAGAGT TCCATAGTAG CAAAGATTCA TTGCCTTGTC CTGCAACTTC 
50
TTGGGATAAC TCTGTCTTCA CCAACTCAAA TGTCCAAGGA TCATCATCCT 
100
TGACCGATAA CAACACTTTA AGCTTGACAA TGGAGATGAA ACAAACTGGT 
150
TTTCAAATGC AGCACTATGA TTCCTCCTCT ACTCAATCCA CTGGAGGAGA 
200
ATCATATAGT GAAGTTGCTA GCTTAAGTGA ACCTACTAAT CGTTATGGCC 
250
ACAACATTGT TGTCACTCAT CTCTCAGGTT ACAAAGAAAA CCCGGAAAAT 
300
CCTATTGGAA GTCATTCGAT ATCAAAGGTG TCTCAAGATT CAGTGGTTCT 
350
TCCTATTGAG GCGGCTTCTT GGCCTTTACA CGGCAATGTA ACGCCACATT 
400
TCAATGGTTT CTTGTCTTTT CCTTATGCAT CACAACACAC GGTGCAGCAT 
450
CCTCAAATCA GAGGGTTGGT TCCGTCTAGA ATGCCTTTGC CTCACAACAT 
500
TCCAGAGAAC GAACCAATTT TCGTCAATGC AAAACAGTAC CAAGCCATTC 
550
TCCGCCGCAG AGAGCGCCGT GCAAAGCTTG AAGCTCAGAA CAAGCTCATC 
600
AAAGTCCGCA AACCATATCT TCACGAGTCG CGGCACCTCC ATGCACTAAA 
650
GAGAGTTAGA GGCTCTGGTG GACGTTTCCT CAACACAAAG AAGCATCAAG 
700
AATCAAATTC CTCACTATCT CCTCCATTCT TGATTCCACC TCATGTCTTC 
750
AAGAACTCTC CAGGAAAGTT CCGGCAAATG GACATTTCAA GGGGTGGGGT 
800
TGTGTCTAGT GTCTCGACAA CATCTTGCTC GGACATAACC GGGAACAACA 
850
ACGACATGTT CCAGCAAAAC CCACAATTCA GGTTCTCAGG TTATCCATCA 
900
AACCACCATG TCTCAGTCCT CATGTGA
950

>AT3G14020.1 longest ORF length:308
MQEFHSSKDS LPCPATSWDN SVFTNSNVQG SSSLTDNNTL SLTMEMKQTG 
50
FQMQHYDSSS TQSTGGESYS EVASLSEPTN RYGHNIVVTH LSGYKENPEN 
100
PIGSHSISKV SQDSVVLPIE AASWPLHGNV TPHFNGFLSF PYASQHTVQH 
150
PQIRGLVPSR MPLPHNIPEN EPIFVNAKQY QAILRRRERR AKLEAQNKLI 
200
KVRKPYLHES RHLHALKRVR GSGGRFLNTK KHQESNSSLS PPFLIPPHVF 
250
KNSPGKFRQM DISRGGVVSS VSTTSCSDIT GNNNDMFQQN PQFRFSGYPS 
300
NHHVSVLM
350