Locus |
Common name |
Short description |
AT3G14020 |
NF-YA6 |
"nuclear factor Y, subunit A6", nuclear factor Y, subunit A6 (.1) |
>AT3G14020.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
318 |
HindIII
| A|AGCTT |
120, 574 |
NheI
| G|CTAGC |
217 |
StyI
| C|C[AT][AT]GG |
84 |
XbaI
| T|CTAGA |
475 |
Click here to view TAIR data
>AT3G14020.1 length:927
ATGCAAGAGT TCCATAGTAG CAAAGATTCA TTGCCTTGTC CTGCAACTTC | 50 |
TTGGGATAAC TCTGTCTTCA CCAACTCAAA TGTCCAAGGA TCATCATCCT | 100 |
TGACCGATAA CAACACTTTA AGCTTGACAA TGGAGATGAA ACAAACTGGT | 150 |
TTTCAAATGC AGCACTATGA TTCCTCCTCT ACTCAATCCA CTGGAGGAGA | 200 |
ATCATATAGT GAAGTTGCTA GCTTAAGTGA ACCTACTAAT CGTTATGGCC | 250 |
ACAACATTGT TGTCACTCAT CTCTCAGGTT ACAAAGAAAA CCCGGAAAAT | 300 |
CCTATTGGAA GTCATTCGAT ATCAAAGGTG TCTCAAGATT CAGTGGTTCT | 350 |
TCCTATTGAG GCGGCTTCTT GGCCTTTACA CGGCAATGTA ACGCCACATT | 400 |
TCAATGGTTT CTTGTCTTTT CCTTATGCAT CACAACACAC GGTGCAGCAT | 450 |
CCTCAAATCA GAGGGTTGGT TCCGTCTAGA ATGCCTTTGC CTCACAACAT | 500 |
TCCAGAGAAC GAACCAATTT TCGTCAATGC AAAACAGTAC CAAGCCATTC | 550 |
TCCGCCGCAG AGAGCGCCGT GCAAAGCTTG AAGCTCAGAA CAAGCTCATC | 600 |
AAAGTCCGCA AACCATATCT TCACGAGTCG CGGCACCTCC ATGCACTAAA | 650 |
GAGAGTTAGA GGCTCTGGTG GACGTTTCCT CAACACAAAG AAGCATCAAG | 700 |
AATCAAATTC CTCACTATCT CCTCCATTCT TGATTCCACC TCATGTCTTC | 750 |
AAGAACTCTC CAGGAAAGTT CCGGCAAATG GACATTTCAA GGGGTGGGGT | 800 |
TGTGTCTAGT GTCTCGACAA CATCTTGCTC GGACATAACC GGGAACAACA | 850 |
ACGACATGTT CCAGCAAAAC CCACAATTCA GGTTCTCAGG TTATCCATCA | 900 |
AACCACCATG TCTCAGTCCT CATGTGA | 950 |
>AT3G14020.1 longest ORF length:308
MQEFHSSKDS LPCPATSWDN SVFTNSNVQG SSSLTDNNTL SLTMEMKQTG | 50 |
FQMQHYDSSS TQSTGGESYS EVASLSEPTN RYGHNIVVTH LSGYKENPEN | 100 |
PIGSHSISKV SQDSVVLPIE AASWPLHGNV TPHFNGFLSF PYASQHTVQH | 150 |
PQIRGLVPSR MPLPHNIPEN EPIFVNAKQY QAILRRRERR AKLEAQNKLI | 200 |
KVRKPYLHES RHLHALKRVR GSGGRFLNTK KHQESNSSLS PPFLIPPHVF | 250 |
KNSPGKFRQM DISRGGVVSS VSTTSCSDIT GNNNDMFQQN PQFRFSGYPS | 300 |
NHHVSVLM | 350 |
|