fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G14230 RAP2.2 related to AP2 2 (.1.2.3)

>AT3G14230.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 887
HindIII A|AGCTT 98
HpaI GTT|AAC 765
NdeI CA|TATG 311
PstI CTGCA|G 506
StyI C|C[AT][AT]GG 168, 403


Click here to view TAIR data

>AT3G14230.1 length:1140
ATGTGTGGAG GAGCTATAAT CTCCGATTTC ATACCTCCGC CGAGGTCCCT 
50
CCGCGTCACT AACGAGTTTA TCTGGCCGGA TCTGAAAAAC AAAGTGAAAG 
100
CTTCAAAGAA GAGATCGAAT AAGCGATCCG ATTTCTTCGA TCTTGACGAT 
150
GATTTCGAAG CTGATTTCCA AGGGTTTAAG GATGACTCGG CTTTTGACTG 
200
CGAAGACGAT GATGATGTCT TCGTCAATGT TAAGCCTTTC GTCTTCACCG 
250
CAACTACTAA GCCCGTAGCT TCCGCTTTCG TCTCCACTGG TATATATTTG 
300
GTAGGTTCAG CATATGCCAA GAAAACTGTA GAGTCCGCTG AGCAAGCTGA 
350
GAAATCTTCT AAGAGGAAGA GGAAGAATCA ATACCGAGGG ATTAGGCAGC 
400
GTCCTTGGGG AAAATGGGCT GCGGAGATCC GTGATCCGAG AAAAGGCTCC 
450
CGAGAATGGC TTGGAACATT CGACACTGCT GAGGAAGCAG CAAGAGCTTA 
500
TGATGCTGCA GCACGCAGAA TCCGTGGCAC GAAAGCTAAG GTGAATTTTC 
550
CCGAGGAGAA GAACCCTAGC GTCGTATCCC AGAAACGTCC TAGTGCTAAG 
600
ACTAATAATC TTCAGAAATC AGTGGCTAAA CCAAACAAAA GCGTAACTTT 
650
GGTTCAGCAG CCAACACATC TGAGTCAGCA GTACTGCAAC AACTCCTTTG 
700
ACAACTCTTT TGGTGATATG AGTTTCATGG AAGAGAAGCC TCAGATGTAC 
750
AACAATCAGT TTGGGTTAAC AAACTCGTTC GATGCTGGAG GTAACAATGG 
800
ATACCAGTAT TTCAGTTCCG ATCAGGGCAG TAACTCCTTC GACTGTTCTG 
850
AGTTCGGGTG GAGTGATCAC GGCCCTAAAA CACCCGAGAT CTCTTCAATG 
900
CTTGTCAATA ACAACGAAGC ATCATTTGTT GAAGAAACCA ATGCAGCCAA 
950
GAAGCTCAAA CCAAACTCTG ATGAGTCAGA CGATCTGATG GCATACCTTG 
1000
ACAACGCCTT GTGGGACACC CCACTAGAAG TGGAAGCCAT GCTTGGCGCA 
1050
GATGCTGGTG CTGTGACTCA GGAAGAGGAA AACCCAGTGG AGCTATGGAG 
1100
CTTAGATGAG ATCAATTTCA TGCTGGAAGG AGACTTTTGA 
1150

>AT3G14230.1 longest ORF length:379
MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD 
50
DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGIYL 
100
VGSAYAKKTV ESAEQAEKSS KRKRKNQYRG IRQRPWGKWA AEIRDPRKGS 
150
REWLGTFDTA EEAARAYDAA ARRIRGTKAK VNFPEEKNPS VVSQKRPSAK 
200
TNNLQKSVAK PNKSVTLVQQ PTHLSQQYCN NSFDNSFGDM SFMEEKPQMY 
250
NNQFGLTNSF DAGGNNGYQY FSSDQGSNSF DCSEFGWSDH GPKTPEISSM 
300
LVNNNEASFV EETNAAKKLK PNSDESDDLM AYLDNALWDT PLEVEAMLGA 
350
DAGAVTQEEE NPVELWSLDE INFMLEGDF
400