|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G14230 | RAP2.2 | related to AP2 2 (.1.2.3) |
>AT3G14230.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 875 |
| HindIII | A|AGCTT | 98 |
| HpaI | GTT|AAC | 753 |
| NdeI | CA|TATG | 299 |
| PstI | CTGCA|G | 494 |
| StyI | C|C[AT][AT]GG | 168, 391 |
Click here to view TAIR data
>AT3G14230.2 length:1128
ATGTGTGGAG GAGCTATAAT CTCCGATTTC ATACCTCCGC CGAGGTCCCT | 50 |
CCGCGTCACT AACGAGTTTA TCTGGCCGGA TCTGAAAAAC AAAGTGAAAG | 100 |
CTTCAAAGAA GAGATCGAAT AAGCGATCCG ATTTCTTCGA TCTTGACGAT | 150 |
GATTTCGAAG CTGATTTCCA AGGGTTTAAG GATGACTCGG CTTTTGACTG | 200 |
CGAAGACGAT GATGATGTCT TCGTCAATGT TAAGCCTTTC GTCTTCACCG | 250 |
CAACTACTAA GCCCGTAGCT TCCGCTTTCG TCTCCACTGT AGGTTCAGCA | 300 |
TATGCCAAGA AAACTGTAGA GTCCGCTGAG CAAGCTGAGA AATCTTCTAA | 350 |
GAGGAAGAGG AAGAATCAAT ACCGAGGGAT TAGGCAGCGT CCTTGGGGAA | 400 |
AATGGGCTGC GGAGATCCGT GATCCGAGAA AAGGCTCCCG AGAATGGCTT | 450 |
GGAACATTCG ACACTGCTGA GGAAGCAGCA AGAGCTTATG ATGCTGCAGC | 500 |
ACGCAGAATC CGTGGCACGA AAGCTAAGGT GAATTTTCCC GAGGAGAAGA | 550 |
ACCCTAGCGT CGTATCCCAG AAACGTCCTA GTGCTAAGAC TAATAATCTT | 600 |
CAGAAATCAG TGGCTAAACC AAACAAAAGC GTAACTTTGG TTCAGCAGCC | 650 |
AACACATCTG AGTCAGCAGT ACTGCAACAA CTCCTTTGAC AACTCTTTTG | 700 |
GTGATATGAG TTTCATGGAA GAGAAGCCTC AGATGTACAA CAATCAGTTT | 750 |
GGGTTAACAA ACTCGTTCGA TGCTGGAGGT AACAATGGAT ACCAGTATTT | 800 |
CAGTTCCGAT CAGGGCAGTA ACTCCTTCGA CTGTTCTGAG TTCGGGTGGA | 850 |
GTGATCACGG CCCTAAAACA CCCGAGATCT CTTCAATGCT TGTCAATAAC | 900 |
AACGAAGCAT CATTTGTTGA AGAAACCAAT GCAGCCAAGA AGCTCAAACC | 950 |
AAACTCTGAT GAGTCAGACG ATCTGATGGC ATACCTTGAC AACGCCTTGT | 1000 |
GGGACACCCC ACTAGAAGTG GAAGCCATGC TTGGCGCAGA TGCTGGTGCT | 1050 |
GTGACTCAGG AAGAGGAAAA CCCAGTGGAG CTATGGAGCT TAGATGAGAT | 1100 |
CAATTTCATG CTGGAAGGAG ACTTTTGA | 1150 |
>AT3G14230.2 longest ORF length:375
MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD | 50 |
DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTVGSA | 100 |
YAKKTVESAE QAEKSSKRKR KNQYRGIRQR PWGKWAAEIR DPRKGSREWL | 150 |
GTFDTAEEAA RAYDAAARRI RGTKAKVNFP EEKNPSVVSQ KRPSAKTNNL | 200 |
QKSVAKPNKS VTLVQQPTHL SQQYCNNSFD NSFGDMSFME EKPQMYNNQF | 250 |
GLTNSFDAGG NNGYQYFSSD QGSNSFDCSE FGWSDHGPKT PEISSMLVNN | 300 |
NEASFVEETN AAKKLKPNSD ESDDLMAYLD NALWDTPLEV EAMLGADAGA | 350 |
VTQEEENPVE LWSLDEINFM LEGDF | 400 |