fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G14230 RAP2.2 related to AP2 2 (.1.2.3)

>AT3G14230.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 872
HindIII A|AGCTT 98
HpaI GTT|AAC 750
NdeI CA|TATG 296
PstI CTGCA|G 491
StyI C|C[AT][AT]GG 168, 388


Click here to view TAIR data

>AT3G14230.3 length:1125
ATGTGTGGAG GAGCTATAAT CTCCGATTTC ATACCTCCGC CGAGGTCCCT 
50
CCGCGTCACT AACGAGTTTA TCTGGCCGGA TCTGAAAAAC AAAGTGAAAG 
100
CTTCAAAGAA GAGATCGAAT AAGCGATCCG ATTTCTTCGA TCTTGACGAT 
150
GATTTCGAAG CTGATTTCCA AGGGTTTAAG GATGACTCGG CTTTTGACTG 
200
CGAAGACGAT GATGATGTCT TCGTCAATGT TAAGCCTTTC GTCTTCACCG 
250
CAACTACTAA GCCCGTAGCT TCCGCTTTCG TCTCCACTGG TTCAGCATAT 
300
GCCAAGAAAA CTGTAGAGTC CGCTGAGCAA GCTGAGAAAT CTTCTAAGAG 
350
GAAGAGGAAG AATCAATACC GAGGGATTAG GCAGCGTCCT TGGGGAAAAT 
400
GGGCTGCGGA GATCCGTGAT CCGAGAAAAG GCTCCCGAGA ATGGCTTGGA 
450
ACATTCGACA CTGCTGAGGA AGCAGCAAGA GCTTATGATG CTGCAGCACG 
500
CAGAATCCGT GGCACGAAAG CTAAGGTGAA TTTTCCCGAG GAGAAGAACC 
550
CTAGCGTCGT ATCCCAGAAA CGTCCTAGTG CTAAGACTAA TAATCTTCAG 
600
AAATCAGTGG CTAAACCAAA CAAAAGCGTA ACTTTGGTTC AGCAGCCAAC 
650
ACATCTGAGT CAGCAGTACT GCAACAACTC CTTTGACAAC TCTTTTGGTG 
700
ATATGAGTTT CATGGAAGAG AAGCCTCAGA TGTACAACAA TCAGTTTGGG 
750
TTAACAAACT CGTTCGATGC TGGAGGTAAC AATGGATACC AGTATTTCAG 
800
TTCCGATCAG GGCAGTAACT CCTTCGACTG TTCTGAGTTC GGGTGGAGTG 
850
ATCACGGCCC TAAAACACCC GAGATCTCTT CAATGCTTGT CAATAACAAC 
900
GAAGCATCAT TTGTTGAAGA AACCAATGCA GCCAAGAAGC TCAAACCAAA 
950
CTCTGATGAG TCAGACGATC TGATGGCATA CCTTGACAAC GCCTTGTGGG 
1000
ACACCCCACT AGAAGTGGAA GCCATGCTTG GCGCAGATGC TGGTGCTGTG 
1050
ACTCAGGAAG AGGAAAACCC AGTGGAGCTA TGGAGCTTAG ATGAGATCAA 
1100
TTTCATGCTG GAAGGAGACT TTTGA
1150

>AT3G14230.3 longest ORF length:374
MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD 
50
DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY 
100
AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG 
150
TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ 
200
KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG 
250
LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN 
300
EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV 
350
TQEEENPVEL WSLDEINFML EGDF
400