Locus |
Common name |
Short description |
AT3G15210 |
ATERF4, RAP2.5, ATERF-4 |
RELATED TO AP2 5, ethylene responsive element binding factor 4 (.1) |
>AT3G15210.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
613, 627, 633 |
PvuII
| CAG|CTG |
619 |
StyI
| C|C[AT][AT]GG |
59, 94 |
XbaI
| T|CTAGA |
630 |
XhoI
| C|TCGAG |
250, 379 |
Click here to view TAIR data
>AT3G15210.1 length:669
ATGGCCAAGA TGGGCTTGAA ACCCGACCCG GCTACTACTA ACCAGACCCA | 50 |
CAATAATGCC AAGGAGATTC GTTACAGAGG CGTTAGGAAG CGTCCTTGGG | 100 |
GCCGTTATGC CGCCGAGATC CGAGATCCGG GCAAGAAAAC CCGCGTCTGG | 150 |
CTTGGCACTT TCGATACGGC TGAAGAGGCG GCGCGTGCTT ACGATACGGC | 200 |
GGCGCGTGAT TTTCGTGGTG CTAAGGCTAA GACCAATTTC CCAACTTTTC | 250 |
TCGAGCTGAG TGACCAGAAG GTCCCTACCG GTTTCGCGCG TAGCCCTAGC | 300 |
CAGAGCAGCA CGCTCGACTG TGCTTCTCCT CCGACGTTAG TTGTGCCTTC | 350 |
AGCGACGGCT GGGAATGTTC CCCCGCAGCT CGAGCTTAGT CTCGGCGGAG | 400 |
GAGGCGGCGG CTCGTGTTAT CAGATCCCGA TGTCGCGTCC TGTCTACTTT | 450 |
TTGGACCTGA TGGGGATCGG TAACGTAGGT CGTGGTCAGC CTCCTCCTGT | 500 |
GACATCGGCG TTTAGATCGC CGGTGGTGCA TGTTGCGACG AAGATGGCTT | 550 |
GTGGTGCCCA AAGCGACTCT GATTCGTCAT CGGTCGTTGA TTTCGAAGGT | 600 |
GGGATGGAGA AGAGATCTCA GCTGTTAGAT CTAGATCTTA ATTTGCCTCC | 650 |
TCCATCGGAA CAGGCCTGA | 700 |
>AT3G15210.1 longest ORF length:222
MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW | 50 |
LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS | 100 |
QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF | 150 |
LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG | 200 |
GMEKRSQLLD LDLNLPPPSE QA | 250 |
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