Locus |
Common name |
Short description |
AT3G15500 |
ATNAC3, ANAC055 |
NAC domain containing protein 55, NAC domain containing protein 3 (.1) |
>AT3G15500.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
344, 448, 506 |
HpaI
| GTT|AAC |
901 |
NcoI
| C|CATGG |
166 |
SalI
| G|TCGAC |
558 |
StyI
| C|C[AT][AT]GG |
166 |
XhoI
| C|TCGAG |
595 |
Click here to view TAIR data
>AT3G15500.1 length:954
ATGGGTCTCC AAGAGCTTGA CCCGTTAGCC CAATTGAGCT TACCGCCGGG | 50 |
TTTTCGGTTT TATCCGACTG ACGAAGAGCT GATGGTTGAA TATCTCTGTA | 100 |
GAAAAGCCGC CGGTCACGAC TTCTCTCTCC AGCTCATAGC TGAAATCGAT | 150 |
CTCTACAAGT TTGATCCATG GGTTTTACCA AGTAAGGCGT TATTCGGTGA | 200 |
AAAAGAATGG TATTTTTTCA GCCCGAGGGA TAGGAAGTAT CCAAACGGGT | 250 |
CAAGACCTAA TCGGGTTGCC GGGTCGGGTT ATTGGAAAGC CACCGGTACG | 300 |
GATAAAGTTA TCTCGACGGA GGGAAGAAGA GTTGGTATCA AGAAAGCTTT | 350 |
GGTGTTTTAC ATTGGAAAAG CTCCAAAAGG AACCAAAACC AATTGGATTA | 400 |
TGCATGAGTA CCGTCTCATC GAACCCTCTC GTCGAAATGG AAGCACCAAG | 450 |
CTTGATGATT GGGTTTTATG TCGAATATAC AAAAAGCAAA CAAGCGCACA | 500 |
AAAACAAGCT TACAATAATC TAATGACGAG TGGTCGTGAA TACAGCAACA | 550 |
ATGGTTCGTC GACATCTTCT TCGTCTCATC AATACGACGA CGTTCTCGAG | 600 |
TCGTTGCATG AGATTGACAA CAGAAGTTTG GGGTTTGCCG CCGGTTCATC | 650 |
AAACGCGCTG CCTCATAGTC ATAGACCGGT TTTAACCAAT CATAAAACCG | 700 |
GGTTTCAGGG TTTAGCCAGG GAGCCAAGTT TTGATTGGGC GAATTTGATT | 750 |
GGACAGAACT CGGTCCCGGA ACTCGGACTG AGTCATAACG TTCCGAGTAT | 800 |
TCGTTACGGT GACGGTGGAA CGCAGCAACA AACTGAGGGG ATTCCTCGGT | 850 |
TTAATAATAA CTCGGACGTC TCGGCTAATC AGGGTTTTAG TGTTGACCCG | 900 |
GTTAACGGAT TTGGGTACTC GGGTCAACAA TCTAGTGGGT TCGGGTTTAT | 950 |
TTGA | 1000 |
>AT3G15500.1 longest ORF length:317
MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID | 50 |
LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT | 100 |
DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK | 150 |
LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE | 200 |
SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI | 250 |
GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP | 300 |
VNGFGYSGQQ SSGFGFI | 350 |
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