fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G15500 ATNAC3, ANAC055 NAC domain containing protein 55, NAC domain containing protein 3 (.1)

>AT3G15500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 344, 448, 506
HpaI GTT|AAC 901
NcoI C|CATGG 166
SalI G|TCGAC 558
StyI C|C[AT][AT]GG 166
XhoI C|TCGAG 595


Click here to view TAIR data

>AT3G15500.1 length:954
ATGGGTCTCC AAGAGCTTGA CCCGTTAGCC CAATTGAGCT TACCGCCGGG 
50
TTTTCGGTTT TATCCGACTG ACGAAGAGCT GATGGTTGAA TATCTCTGTA 
100
GAAAAGCCGC CGGTCACGAC TTCTCTCTCC AGCTCATAGC TGAAATCGAT 
150
CTCTACAAGT TTGATCCATG GGTTTTACCA AGTAAGGCGT TATTCGGTGA 
200
AAAAGAATGG TATTTTTTCA GCCCGAGGGA TAGGAAGTAT CCAAACGGGT 
250
CAAGACCTAA TCGGGTTGCC GGGTCGGGTT ATTGGAAAGC CACCGGTACG 
300
GATAAAGTTA TCTCGACGGA GGGAAGAAGA GTTGGTATCA AGAAAGCTTT 
350
GGTGTTTTAC ATTGGAAAAG CTCCAAAAGG AACCAAAACC AATTGGATTA 
400
TGCATGAGTA CCGTCTCATC GAACCCTCTC GTCGAAATGG AAGCACCAAG 
450
CTTGATGATT GGGTTTTATG TCGAATATAC AAAAAGCAAA CAAGCGCACA 
500
AAAACAAGCT TACAATAATC TAATGACGAG TGGTCGTGAA TACAGCAACA 
550
ATGGTTCGTC GACATCTTCT TCGTCTCATC AATACGACGA CGTTCTCGAG 
600
TCGTTGCATG AGATTGACAA CAGAAGTTTG GGGTTTGCCG CCGGTTCATC 
650
AAACGCGCTG CCTCATAGTC ATAGACCGGT TTTAACCAAT CATAAAACCG 
700
GGTTTCAGGG TTTAGCCAGG GAGCCAAGTT TTGATTGGGC GAATTTGATT 
750
GGACAGAACT CGGTCCCGGA ACTCGGACTG AGTCATAACG TTCCGAGTAT 
800
TCGTTACGGT GACGGTGGAA CGCAGCAACA AACTGAGGGG ATTCCTCGGT 
850
TTAATAATAA CTCGGACGTC TCGGCTAATC AGGGTTTTAG TGTTGACCCG 
900
GTTAACGGAT TTGGGTACTC GGGTCAACAA TCTAGTGGGT TCGGGTTTAT 
950
TTGA
1000

>AT3G15500.1 longest ORF length:317
MGLQELDPLA QLSLPPGFRF YPTDEELMVE YLCRKAAGHD FSLQLIAEID 
50
LYKFDPWVLP SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT 
100
DKVISTEGRR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK 
150
LDDWVLCRIY KKQTSAQKQA YNNLMTSGRE YSNNGSSTSS SSHQYDDVLE 
200
SLHEIDNRSL GFAAGSSNAL PHSHRPVLTN HKTGFQGLAR EPSFDWANLI 
250
GQNSVPELGL SHNVPSIRYG DGGTQQQTEG IPRFNNNSDV SANQGFSVDP 
300
VNGFGYSGQQ SSGFGFI
350