Locus |
Common name |
Short description |
AT3G15540 |
MSG2, IAA19 |
MASSUGU 2, indole-3-acetic acid inducible 19 (.1) |
>AT3G15540.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
263 |
PstI
| CTGCA|G |
568 |
PvuII
| CAG|CTG |
252 |
StyI
| C|C[AT][AT]GG |
351, 496 |
XbaI
| T|CTAGA |
510 |
Click here to view TAIR data
>AT3G15540.1 length:594
ATGGAGAAGG AAGGACTCGG GCTTGAGATA ACGGAGCTGA GATTGGGGCT | 50 |
TCCGGGGAGA GATGTGGCAG AGAAGATGAT GAAGAAGAGA GCTTTCACGG | 100 |
AGATGAATAT GACGTCGTCG GGTAGTAATA GTGATCAATG TGAAAGCGGC | 150 |
GTCGTTTCAT CTGGTGGTGA CGCTGAGAAG GTTAATGATT CGCCGGCGGC | 200 |
GAAAAGCCAG GTGGTGGGGT GGCCACCGGT TTGTTCTTAC CGGAAGAAAA | 250 |
ACAGCTGTAA GGAAGCTTCG ACCACGAAAG TGGGGTTAGG GTATGTGAAA | 300 |
GTGAGCATGG ATGGTGTGCC TTATTTGAGG AAGATGGATC TTGGTTCGAG | 350 |
CCAAGGCTAT GATGATCTAG CCTTTGCTCT TGATAAGCTC TTCGGTTTCC | 400 |
GTGGCATCGG TGTGGCCTTG AAAGATGGTG ACAACTGCGA ATACGTTACC | 450 |
ATATACGAAG ACAAAGATGG AGACTGGATG CTCGCCGGTG ATGTACCTTG | 500 |
GGGGATGTTT CTAGAGTCAT GCAAGAGGTT GAGAATAATG AAAAGATCGG | 550 |
ATGCTACCGG GTTTGGGCTG CAGCCTAGAG GAGTAGACGA GTGA | 600 |
>AT3G15540.1 longest ORF length:197
MEKEGLGLEI TELRLGLPGR DVAEKMMKKR AFTEMNMTSS GSNSDQCESG | 50 |
VVSSGGDAEK VNDSPAAKSQ VVGWPPVCSY RKKNSCKEAS TTKVGLGYVK | 100 |
VSMDGVPYLR KMDLGSSQGY DDLAFALDKL FGFRGIGVAL KDGDNCEYVT | 150 |
IYEDKDGDWM LAGDVPWGMF LESCKRLRIM KRSDATGFGL QPRGVDE | 200 |
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