Locus |
Common name |
Short description |
AT3G16280 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT3G16280.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
397 |
NcoI
| C|CATGG |
428 |
StyI
| C|C[AT][AT]GG |
428 |
Click here to view TAIR data
>AT3G16280.1 length:711
ATGACGTCAC TCAACAGCTC TGCATCACCA ACATCATCGT CATCAGACCA | 50 |
ATCTGATGCA ACTACTACAA CAAGCACCCA CTTGTCTGAA GAAGAAGCTC | 100 |
CACCCAGAAA CAACAACACA AGAAAGAGAA GGAGAGATTC TTCTTCTGCT | 150 |
TCTTCATCTT CTTCAATGCA ACATCCTGTT TACAGAGGTG TGCGGATGAG | 200 |
AAGTTGGGGC AAATGGGTCT CCGAGATCCG ACAACCTCGT AAGAAAACTC | 250 |
GTATTTGGCT CGGCACTTTT GTCACCGCTG ATATGGCTGC TCGTGCTCAC | 300 |
GACGTCGCTG CTCTCACCAT CAAAGGCTCC TCCGCCGTCT TAAATTTCCC | 350 |
TGAGCTTGCT TCTCTCTTCC CTCGTCCGGC GTCATCATCG CCGCATGATA | 400 |
TCCAGACAGC CGCCGCAGAA GCCGCCGCCA TGGTGGTCGA AGAAAAACTG | 450 |
TTAGAGAAGG ATGAGGCTCC GGAGGCCCCA CCTTCGTCGG AATCTTCTTA | 500 |
CGTGGCGGCG GAGTCAGAGG ATGAGGAGAG GTTGGAGAAA ATTGTGGAGC | 550 |
TGCCTAACAT TGAAGAAGGA AGTTATGACG AGAGTGTGAC ATCACGTGCT | 600 |
GATCTGGCTT ATTCTGAGCC GTTCGATTGT TGGGTGTATC CTCCGGTTAT | 650 |
GGATTTTTAT GAAGAAATAT CGGAGTTTAA TTTCGTGGAA TTGTGGAGCT | 700 |
TTAATCACTA A | 750 |
>AT3G16280.1 longest ORF length:236
MTSLNSSASP TSSSSDQSDA TTTTSTHLSE EEAPPRNNNT RKRRRDSSSA | 50 |
SSSSSMQHPV YRGVRMRSWG KWVSEIRQPR KKTRIWLGTF VTADMAARAH | 100 |
DVAALTIKGS SAVLNFPELA SLFPRPASSS PHDIQTAAAE AAAMVVEEKL | 150 |
LEKDEAPEAP PSSESSYVAA ESEDEERLEK IVELPNIEEG SYDESVTSRA | 200 |
DLAYSEPFDC WVYPPVMDFY EEISEFNFVE LWSFNH | 250 |
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