|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G16350 | Homeodomain-like superfamily protein (.1) |
>AT3G16350.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| HpaI | GTT|AAC | 159 |
| SacI | GAGCT|C | 712 |
| SmaI | CCC|GGG | 825 |
| SpeI | A|CTAGT | 559 |
| StyI | C|C[AT][AT]GG | 412 |
Click here to view TAIR data
>AT3G16350.1 length:1164
ATGACTCGTC GGTGTTCGCA TTGTAGCAAC AATGGGCACA ATTCACGCAC | 50 |
GTGTCCAACG CGTGGTGGTG GCACGTGCGG TGGAAGTGGC GGAGGAGGAG | 100 |
GAGGTGGTGG TGGAGGAGGG TCTGGTTCCT CCTCCGCCGT GAAGTTATTT | 150 |
GGTGTGAGGT TAACGGATGG CTCGATTATT AAAAAGAGTG CGAGTATGGG | 200 |
TAATCTCTCG GCATTGGCTG TTGCGGCGGC GGCGGCAACG CACCACCGTT | 250 |
TATCTCCGTC GTCTCCTCTG GCGACGTCAA ATCTTAATGA TTCGCCGTTA | 300 |
TCGGATCATG CCCGATACTC TAATTTGCAT CATAATGAAG GGTATTTATC | 350 |
TGATGATCCT GCTCATGGTT CTGGGTCTAG TCACCGTCGT GGTGAGAGGA | 400 |
AGAGAGGTGT TCCTTGGACT GAAGAGGAAC ATAGACTATT CTTAGTCGGT | 450 |
CTTCAGAAAC TCGGGAAAGG AGATTGGCGC GGTATTTCGA GAAACTATGT | 500 |
AACGTCAAGA ACTCCTACAC AAGTGGCTAG TCATGCTCAA AAGTATTTTA | 550 |
TTCGACATAC TAGTTCAAGC CGCAGGAAAA GACGGTCTAG CCTCTTCGAC | 600 |
ATGGTTACAG ATGAGATGGT AACCGATTCA TCGCCAACAC AGGAAGAGCA | 650 |
GACCTTAAAC GGTTCCTCTC CAAGCAAGGA ACCTGAAAAG AAAAGCTACC | 700 |
TTCCTTCACT TGAGCTCTCA CTCAATAATA CCACAGAAGC TGAAGAGGTC | 750 |
GTAGCCACGG CGCCACGACA GGAAAAATCT CAAGAAGCTA TAGAACCATC | 800 |
AAATGGTGTT TCACCAATGC TAGTCCCGGG TGGCTTCTTT CCTCCTTGTT | 850 |
TTCCAGTGAC TTACACGATT TGGCTCCCTG CGTCACTTCA CGGAACAGAA | 900 |
CATGCCTTAA ACGCTGAGAC TTCTTCTCAG CAGCATCAGG TCCTAAAACC | 950 |
AAAACCTGGA TTTGCTAAAG AACGTGTGAA CATGGACGAG TTGGTCGGTA | 1000 |
TGTCTCAGCT TAGCATAGGA ATGGCGACAA GACACGAAAC CGAAACTTCC | 1050 |
CCTTCCCCGC TATCTTTGAG ACTAGAGCCC TCAAGGCCAT CAGCGTTTCA | 1100 |
CTCGAATGGC TCGGTTAATG GTGCAGATTT GAGTAAAGGC AACAGCGCGA | 1150 |
TTCAGGCTAT CTAA | 1200 |
>AT3G16350.1 longest ORF length:387
MTRRCSHCSN NGHNSRTCPT RGGGTCGGSG GGGGGGGGGG SGSSSAVKLF | 50 |
GVRLTDGSII KKSASMGNLS ALAVAAAAAT HHRLSPSSPL ATSNLNDSPL | 100 |
SDHARYSNLH HNEGYLSDDP AHGSGSSHRR GERKRGVPWT EEEHRLFLVG | 150 |
LQKLGKGDWR GISRNYVTSR TPTQVASHAQ KYFIRHTSSS RRKRRSSLFD | 200 |
MVTDEMVTDS SPTQEEQTLN GSSPSKEPEK KSYLPSLELS LNNTTEAEEV | 250 |
VATAPRQEKS QEAIEPSNGV SPMLVPGGFF PPCFPVTYTI WLPASLHGTE | 300 |
HALNAETSSQ QHQVLKPKPG FAKERVNMDE LVGMSQLSIG MATRHETETS | 350 |
PSPLSLRLEP SRPSAFHSNG SVNGADLSKG NSAIQAI | 400 |