| Locus |
Common name |
Short description |
| AT3G16770 |
RAP2.03, ATEBP, RAP2.3 ,ERF72 |
RELATED TO AP2 3, ETHYLENE RESPONSE FACTOR 72, ethylene-responsive element binding protein (.1) |
>AT3G16770.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XbaI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AciI
| C|CGC |
99, 440 |
| AluI
| AG|CT |
87, 337, 390, 626, 645, 678 |
| AlwNI
| CAGNNN|CTG |
577 |
| BanII
| GPuGCPy|C |
88 |
| BglII
| A|GATCT |
405 |
| BsaAI
| PyAC|GTPu |
245 |
| BsaBI
| GATNN|NNATC |
605 |
| BsaJI
| C|CNNGG |
44, 50, 205, 256, 344, 375, 698 |
| BsiHKAI
| G[AT]GC[AT]|C |
88 |
| BslI
| CCNNNNN|NNGG |
294, 647 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
88 |
| BssKI
| |CCNGG |
204, 533 |
| BstF5I
| GGATGNN| |
714 |
| BstYI
| Pu|GATCPy |
285, 371, 405 |
| BtgI
| C|CPuPyGG |
256, 344, 375 |
| BtsI
| GCAGTGNN| |
180 |
| Cac8I
| GCN|NGC |
192 |
| DdeI
| C|TNAG |
70, 274, 499, 579 |
| DpnI
| GA-CH3|TC |
284, 370, 404, 456, 464, 605 |
| DpnII
| |GATC |
284, 370, 404, 456, 464, 605 |
| EaeI
| Py|GGCCPu |
362 |
| EcoRV
| GAT|ATC |
621 |
| Fnu4HI
| GC|NGC |
102, 270, 339, 360 |
| HaeIII
| GG|CC |
46, 53, 361 |
| HincII
| GTPy|PuAC |
160 |
| HinfI
| G|ANTC |
278, 633, 674, 687 |
| HpaI
| GTT|AAC |
160 |
| HpaII
| C|CGG |
203, 473, 533, 596 |
| Hpy188I
| TCN|GA |
21, 84, 500, 572, 608, 696 |
| Hpy99I
| CG[AT]CG| |
107, 733 |
| HpyCH4III
| ACN|GT |
652 |
| HpyCH4IV
| A|CGT |
162, 244, 317 |
| HpyCH4V
| TG|CA |
408 |
| MboI
| |GATC |
284, 370, 404, 456, 464, 605 |
| MseI
| T|TAA |
159, 515 |
| MspI
| C|CGG |
203, 473, 533, 596 |
| MwoI
| GCNNNNN|NNGC |
102, 336, 449 |
| N.BstNBI
| GAGTCNNNN|N |
679, 692 |
| NciI
| CC|[CG]GG |
204, 533 |
| NcoI
| C|CATGG |
256, 344 |
| NlaIII
| CATG| |
255, 343 |
| RsaI
| GT|AC |
315 |
| SacI
| GAGCT|C |
88 |
| Sau3AI
| |GATC |
284, 370, 404, 456, 464, 605 |
| Sau96I
| G|GNCC |
53 |
| ScrFI
| CC|NGG |
204, 533 |
| SmlI
| C|TPyPuAG |
643 |
| SnaBI
| TAC|GTA |
245 |
| StyI
| C|C[AT][AT]GG |
44, 50, 256, 344 |
| Taqƒ¿I
| T|CGA |
90, 280, 623 |
| TfiI
| G|A[AT]TC |
278, 633 |
| TseI
| G|C[AT]GC |
339 |
| Tsp45I
| |GT[CG]AC |
39 |
| Tsp509I
| |AATT |
428 |
| TspRI
| NNCA[CG]TGNN| |
180 |
| XcmI
| CCANNNNN|NNNNTGG |
265 |
Click here to view TAIR data
>AT3G16770.1 length:747
ATGTGTGGCG GTGCTATTAT TTCCGATTAT GCCCCTCTCG TCACCAAGGC | 50 |
CAAGGGCCGT AAACTCACGG CTGAGGAACT CTGGTCAGAG CTCGATGCTT | 100 |
CCGCCGCCGA CGACTTCTGG GGTTTCTATT CCACCTCCAA ACTCCATCCC | 150 |
ACCAACCAAG TTAACGTGAA AGAGGAGGCA GTGAAGAAGG AGCAGGCAAC | 200 |
AGAGCCGGGG AAACGGAGGA AGAGGAAGAA TGTTTATAGA GGGATACGTA | 250 |
AGCGTCCATG GGGAAAATGG GCGGCTGAGA TTCGAGATCC ACGAAAAGGT | 300 |
GTTAGAGTTT GGCTTGGTAC GTTCAACACG GCGGAGGAAG CTGCCATGGC | 350 |
TTATGATGTT GCGGCCAAGC AGATCCGTGG TGATAAAGCC AAGCTCAACT | 400 |
TCCCAGATCT GCACCATCCT CCTCCTCCTA ATTATACTCC TCCGCCGTCA | 450 |
TCGCCACGAT CAACCGATCA GCCTCCGGCG AAGAAGGTCT GCGTTGTCTC | 500 |
TCAGAGTGAG AGCGAGTTAA GTCAGCCGAG TTTCCCGGTG GAGTGTATAG | 550 |
GATTTGGAAA TGGGGACGAG TTTCAGAACC TGAGTTACGG ATTTGAGCCG | 600 |
GATTATGATC TGAAACAGCA GATATCGAGC TTGGAATCGT TCCTTGAGCT | 650 |
GGACGGTAAC ACGGCGGAGC AACCGAGTCA GCTTGATGAG TCCGTTTCCG | 700 |
AGGTGGATAT GTGGATGCTT GATGATGTCA TTGCGTCGTA TGAGTAA | 750 |
>AT3G16770.1 longest ORF length:248
MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP | 50 |
TNQVNVKEEA VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG | 100 |
VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS | 150 |
SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP | 200 |
DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE | 250 |
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