fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G16770 RAP2.03, ATEBP, RAP2.3 ,ERF72 RELATED TO AP2 3, ETHYLENE RESPONSE FACTOR 72, ethylene-responsive element binding protein (.1)

>AT3G16770.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 405
EcoRV GAT|ATC 621
HpaI GTT|AAC 160
NcoI C|CATGG 256, 344
SacI GAGCT|C 88
StyI C|C[AT][AT]GG 44, 50, 256, 344


Click here to view TAIR data

>AT3G16770.1 length:747
ATGTGTGGCG GTGCTATTAT TTCCGATTAT GCCCCTCTCG TCACCAAGGC 
50
CAAGGGCCGT AAACTCACGG CTGAGGAACT CTGGTCAGAG CTCGATGCTT 
100
CCGCCGCCGA CGACTTCTGG GGTTTCTATT CCACCTCCAA ACTCCATCCC 
150
ACCAACCAAG TTAACGTGAA AGAGGAGGCA GTGAAGAAGG AGCAGGCAAC 
200
AGAGCCGGGG AAACGGAGGA AGAGGAAGAA TGTTTATAGA GGGATACGTA 
250
AGCGTCCATG GGGAAAATGG GCGGCTGAGA TTCGAGATCC ACGAAAAGGT 
300
GTTAGAGTTT GGCTTGGTAC GTTCAACACG GCGGAGGAAG CTGCCATGGC 
350
TTATGATGTT GCGGCCAAGC AGATCCGTGG TGATAAAGCC AAGCTCAACT 
400
TCCCAGATCT GCACCATCCT CCTCCTCCTA ATTATACTCC TCCGCCGTCA 
450
TCGCCACGAT CAACCGATCA GCCTCCGGCG AAGAAGGTCT GCGTTGTCTC 
500
TCAGAGTGAG AGCGAGTTAA GTCAGCCGAG TTTCCCGGTG GAGTGTATAG 
550
GATTTGGAAA TGGGGACGAG TTTCAGAACC TGAGTTACGG ATTTGAGCCG 
600
GATTATGATC TGAAACAGCA GATATCGAGC TTGGAATCGT TCCTTGAGCT 
650
GGACGGTAAC ACGGCGGAGC AACCGAGTCA GCTTGATGAG TCCGTTTCCG 
700
AGGTGGATAT GTGGATGCTT GATGATGTCA TTGCGTCGTA TGAGTAA
750

>AT3G16770.1 longest ORF length:248
MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP 
50
TNQVNVKEEA VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG 
100
VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS 
150
SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP 
200
DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
250