Locus |
Common name |
Short description |
AT3G16770 |
RAP2.03, ATEBP, RAP2.3 ,ERF72 |
RELATED TO AP2 3, ETHYLENE RESPONSE FACTOR 72, ethylene-responsive element binding protein (.1) |
>AT3G16770.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
405 |
EcoRV
| GAT|ATC |
621 |
HpaI
| GTT|AAC |
160 |
NcoI
| C|CATGG |
256, 344 |
SacI
| GAGCT|C |
88 |
StyI
| C|C[AT][AT]GG |
44, 50, 256, 344 |
Click here to view TAIR data
>AT3G16770.1 length:747
ATGTGTGGCG GTGCTATTAT TTCCGATTAT GCCCCTCTCG TCACCAAGGC | 50 |
CAAGGGCCGT AAACTCACGG CTGAGGAACT CTGGTCAGAG CTCGATGCTT | 100 |
CCGCCGCCGA CGACTTCTGG GGTTTCTATT CCACCTCCAA ACTCCATCCC | 150 |
ACCAACCAAG TTAACGTGAA AGAGGAGGCA GTGAAGAAGG AGCAGGCAAC | 200 |
AGAGCCGGGG AAACGGAGGA AGAGGAAGAA TGTTTATAGA GGGATACGTA | 250 |
AGCGTCCATG GGGAAAATGG GCGGCTGAGA TTCGAGATCC ACGAAAAGGT | 300 |
GTTAGAGTTT GGCTTGGTAC GTTCAACACG GCGGAGGAAG CTGCCATGGC | 350 |
TTATGATGTT GCGGCCAAGC AGATCCGTGG TGATAAAGCC AAGCTCAACT | 400 |
TCCCAGATCT GCACCATCCT CCTCCTCCTA ATTATACTCC TCCGCCGTCA | 450 |
TCGCCACGAT CAACCGATCA GCCTCCGGCG AAGAAGGTCT GCGTTGTCTC | 500 |
TCAGAGTGAG AGCGAGTTAA GTCAGCCGAG TTTCCCGGTG GAGTGTATAG | 550 |
GATTTGGAAA TGGGGACGAG TTTCAGAACC TGAGTTACGG ATTTGAGCCG | 600 |
GATTATGATC TGAAACAGCA GATATCGAGC TTGGAATCGT TCCTTGAGCT | 650 |
GGACGGTAAC ACGGCGGAGC AACCGAGTCA GCTTGATGAG TCCGTTTCCG | 700 |
AGGTGGATAT GTGGATGCTT GATGATGTCA TTGCGTCGTA TGAGTAA | 750 |
>AT3G16770.1 longest ORF length:248
MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP | 50 |
TNQVNVKEEA VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG | 100 |
VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS | 150 |
SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP | 200 |
DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE | 250 |
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