fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G16857 ARR1 response regulator 1 (.1.2)

>AT3G16857.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 797, 1977
EcoRV GAT|ATC 1587
HindIII A|AGCTT 295
HpaI GTT|AAC 607, 1630
NdeI CA|TATG 271, 441
PvuII CAG|CTG 560
StyI C|C[AT][AT]GG 903
XbaI T|CTAGA 315


Click here to view TAIR data

>AT3G16857.1 length:2010
ATGATGAATC CGAGTCACGG AAGAGGACTC GGATCGGCTG GTGGGTCCAG 
50
CTCCGGTAGA AATCAAGGAG GTGGTGGTGA GACCGTCGTC GAGATGTTTC 
100
CTTCTGGTCT TCGAGTTCTT GTCGTTGACG ATGACCCAAC TTGTCTCATG 
150
ATCTTAGAGA GGATGCTTAG GACTTGTCTT TACGAAGTAA CGAAATGCAA 
200
CAGAGCAGAG ATGGCATTGT CTCTGCTCCG GAAGAACAAA CATGGATTCG 
250
ATATAGTAAT CAGTGATGTT CATATGCCTG ACATGGACGG TTTCAAGCTT 
300
CTTGAGCATG TTGGTCTAGA GATGGACTTA CCTGTTATCA TGATGTCTGC 
350
GGATGATTCA AAGAGTGTGG TTCTAAAGGG AGTAACGCAC GGTGCGGTTG 
400
ATTACCTTAT CAAGCCTGTA CGTATGGAGG CACTTAAGAA CATATGGCAG 
450
CATGTAGTTA GGAAGAGGAG AAGTGAATGG AGTGTACCGG AACATTCTGG 
500
GAGCATTGAG GAGACTGGCG AGAGACAGCA GCAGCAACAT AGAGGAGGTG 
550
GTGGTGGTGC AGCTGTTTCT GGTGGAGAGG ATGCGGTGGA TGATAACTCA 
600
TCCTCGGTTA ACGAAGGTAA CAATTGGAGG AGCAGTTCAC GGAAGAGGAA 
650
AGACGAGGAA GGAGAAGAGC AAGGAGATGA TAAGGACGAA GATGCGTCGA 
700
ATTTGAAGAA ACCGCGTGTC GTCTGGTCTG TTGAATTGCA TCAGCAGTTT 
750
GTTGCTGCTG TTAATCAGCT CGGCGTTGAG AAGGCGGTTC CTAAAAAGAT 
800
CTTAGAGCTG ATGAATGTTC CTGGTCTAAC CCGAGAAAAC GTAGCAAGTC 
850
ACCTCCAGAA ATACCGGATA TATCTAAGAC GGCTTGGAGG GGTATCGCAG 
900
CACCAAGGCA ATCTTAACAA CTCGTTTATG ACGGGTCAGG ATGCGAGCTT 
950
CGGACCTCTT TCGACATTGA ATGGGTTTGA TCTTCAAGCA CTAGCCGTCA 
1000
CAGGTCAGTT ACCTGCACAG AGTCTTGCAC AGCTTCAAGC CGCTGGTTTA 
1050
GGCCGGCCTG CGATGGTCTC TAAGTCAGGT TTGCCGGTTT CCTCCATTGT 
1100
GGATGAGAGA AGCATCTTCA GCTTTGACAA CACGAAAACA AGATTTGGAG 
1150
AAGGGCTTGG GCATCACGGG CAACAACCCC AACAGCAACC ACAGATGAAC 
1200
TTACTTCACG GTGTCCCCAC GGGTTTACAA CAGCAGCTTC CTATGGGTAA 
1250
TCGAATGAGT ATTCAACAAC AGATTGCTGC TGTTCGAGCT GGAAATAGTG 
1300
TTCAAAACAA CGGAATGCTG ATGCCTCTAG CGGGTCAGCA GTCTTTGCCT 
1350
CGGGGACCAC CGCCTATGCT AACCTCTTCG CAATCATCCA TCAGGCAGCC 
1400
GATGTTATCA AACCGCATTT CCGAGAGAAG TGGTTTCTCT GGAAGGAACA 
1450
ATATCCCCGA GAGCAGCAGA GTGTTACCGA CAAGTTACAC TAATCTCACA 
1500
ACACAACACT CATCAAGCTC GATGCCTTAT AACAACTTCC AACCAGAACT 
1550
TCCCGTGAAC AGTTTCCCGC TGGCAAGTGC ACCAGGGATA TCAGTACCGG 
1600
TTCGGAAAGC CACTTCTTAC CAGGAAGAGG TTAACAGCTC CGAAGCGGGT 
1650
TTCACTACGC CGAGCTACGA CATGTTCACC ACCAGACAGA ATGATTGGGA 
1700
TCTGAGGAAT ATTGGAATAG CCTTTGACTC ACATCAGGAC TCAGAATCCG 
1750
CTGCGTTTTC CGCTTCAGAA GCCTACTCTT CTTCGTCCAT GTCAAGACAC 
1800
AACACGACAG TTGCAGCCAC CGAGCATGGC CGAAACCACC AGCAGCCACC 
1850
ATCGGGAATG GTACAGCACC ATCAGGTTTA TGCAGACGGA AACGGTGGTT 
1900
CAGTGAGGGT GAAATCAGAG AGAGTGGCTA CGGATACAGC AACAATGGCG 
1950
TTTCACGAGC AGTATAGTAA TCAAGAAGAT CTTATGAGCG CACTTCTTAA 
2000
GCAGGTTTGA 
2050

>AT3G16857.1 longest ORF length:669
MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM 
50
ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL 
100
LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ 
150
HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS 
200
SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF 
250
VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ 
300
HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL 
350
GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN 
400
LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP 
450
RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT 
500
TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG 
550
FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH 
600
NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA 
650
FHEQYSNQED LMSALLKQV
700