fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G16870 GATA17 GATA transcription factor 17 (.1)

>AT3G16870.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 75


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>AT3G16870.1 length:573
ATGTCTGAGG GATCAGAAGA TACGAAAACA AAACTCGACT CTGCCGGAGA 
50
GTTATCAGAT GTTGATAACG AGAACTGCAG TAGCAGCGGA AGTGGCGGTG 
100
GTAGTAGTTC TGGTGATACC AAAAGGACTT GCGTTGATTG CGGAACTATC 
150
CGAACTCCTC TTTGGCGTGG TGGTCCTGCC GGACCAAAGT CATTGTGCAA 
200
TGCTTGTGGG ATCAAGAGTA GGAAGAAGAG ACAAGCAGCA CTTGGTATGA 
250
GATCAGAGGA GAAGAAGAAG AACAGAAAAA GCAATTGCAA TAATGATCTA 
300
AACCTCGACC ATCGAAACGC CAAGAAATAC AAAATCAACA TAGTTGATGA 
350
TGGCAAGATC GACATCGATG ATGATCCGAA AATTTGCAAT AACAAGCGTA 
400
GTAGTAGTAG TAGCAGTAAC AAAGGAGTGA GTAAGTTTTT GGATTTAGGG 
450
TTTAAAGTAC CGGTGATGAA GAGATCAGCG GTTGAGAAGA AGAGGTTATG 
500
GAGAAAACTC GGTGAGGAAG AAAGAGCTGC TGTGCTTCTC ATGGCTCTCT 
550
CTTGTAGCTC TGTTTACGCC TAA
600

>AT3G16870.1 longest ORF length:190
MSEGSEDTKT KLDSAGELSD VDNENCSSSG SGGGSSSGDT KRTCVDCGTI 
50
RTPLWRGGPA GPKSLCNACG IKSRKKRQAA LGMRSEEKKK NRKSNCNNDL 
100
NLDHRNAKKY KINIVDDGKI DIDDDPKICN NKRSSSSSSN KGVSKFLDLG 
150
FKVPVMKRSA VEKKRLWRKL GEEERAAVLL MALSCSSVYA 
200