Locus |
Common name |
Short description |
AT3G17100 |
bHLH147, AIF3 |
sequence-specific DNA binding transcription factors (.1.2) |
>AT3G17100.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
170 |
HpaI
| GTT|AAC |
411 |
PvuII
| CAG|CTG |
482 |
SacI
| GAGCT|C |
51 |
Click here to view TAIR data
>AT3G17100.2 length:693
ATGGAGTCTA TATCTCCGGT ATCGAATCAG CTTCTTCAGC CGACGACGAC | 50 |
GAGCTCTAAT TCCGATCGCT CTCGTCGTAA GCGTAAGAAG AAATCATCGC | 100 |
CATCATCGGT TGAGAAATCT CCATCTCCGT CAATATCGTT GGAGAAATGG | 150 |
AGATCGGAGA AGCAGCAACA GATCTACTCA ACGAAGCTAG TTCATGCTTT | 200 |
AAGAGAGCTA CGAATCAGCC AACAACCATC TTCATCATCA TCTTCTTCGA | 250 |
TTCCACGTGG AGGTAGAGCC GTACGTGAAG TCGCCGATAG AGCTTTAGCA | 300 |
GTTGCGGCGA GAGGTAAAAC GTTATGGAGT CGAGCGATAC TTTCAAAAGC | 350 |
TGTAAAACTC AAATTCAGGA AACACAAACG CCAGAGAATC TCTAATCCGA | 400 |
CGACGACGAC GTTAACCACC GGGAGTATCA GGTCAAAGAA ACAGAGAGCG | 450 |
ACGGTTTTGA GGCTTAAGGC TAAAGGTTTG CCAGCTGTAC AGAGGAAAGT | 500 |
GAAAGTACTG AGCCGGTTAG TTCCCGGTTG CCGTAAACAA TCATTACCGG | 550 |
TGGTTTTAGA AGAAACCACT GATTATATAG CTGCGATGGA GATGCAGATT | 600 |
CGTACTATGA CTGCGATTCT CTCCGCCGTT AGTTCTTCTC CTCCGCCGCC | 650 |
AACGCCAGGT CACGAAGGGG GACAAACACA CATGCTTGGT TAG | 700 |
>AT3G17100.2 longest ORF length:230
MESISPVSNQ LLQPTTTSSN SDRSRRKRKK KSSPSSVEKS PSPSISLEKW | 50 |
RSEKQQQIYS TKLVHALREL RISQQPSSSS SSSIPRGGRA VREVADRALA | 100 |
VAARGKTLWS RAILSKAVKL KFRKHKRQRI SNPTTTTLTT GSIRSKKQRA | 150 |
TVLRLKAKGL PAVQRKVKVL SRLVPGCRKQ SLPVVLEETT DYIAAMEMQI | 200 |
RTMTAILSAV SSSPPPPTPG HEGGQTHMLG | 250 |
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