Locus |
Common name |
Short description |
AT3G17600 |
IAA31 |
indole-3-acetic acid inducible 31 (.1) |
>AT3G17600.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
415 |
NdeI
| CA|TATG |
371 |
SalI
| G|TCGAC |
43 |
StyI
| C|C[AT][AT]GG |
415 |
XbaI
| T|CTAGA |
157 |
Click here to view TAIR data
>AT3G17600.1 length:477
ATGGAGGTCT CTAACTCTTG TTCTTCATTT TCTTCATCCT CTGTCGACAG | 50 |
TACTAAACCT TCTCCTTCTG AATCTTCTGT TAATCTCTCC CTTAGTCTCA | 100 |
CATTTCCTTC TACTTCTCCA CAAAGAGAAG CAAGACAAGA TTGGCCACCG | 150 |
ATAAAGTCTA GATTAAGAGA TACACTAAAG GGTCGTCGTC TTCTTCGTCG | 200 |
TGGTGATGAC ACTTCTCTCT TTGTTAAGGT TTATATGGAA GGTGTTCCCA | 250 |
TTGGAAGAAA ACTCGACCTT TGCGTATTCT CAGGCTACGA GAGTCTATTA | 300 |
GAAAATCTCT CTCACATGTT CGATACTTCA ATCATCTGCG GTAATCGAGA | 350 |
TCGAAAACAT CATGTTTTGA CATATGAAGA CAAGGATGGA GATTGGATGA | 400 |
TGGTCGGAGA TATTCCATGG GATATGTTTC TTGAAACCGT GAGAAGACTA | 450 |
AAGATCACGA GACCGGAGAG GTATTAA | 500 |
>AT3G17600.1 longest ORF length:158
MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP | 50 |
IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL | 100 |
ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL | 150 |
KITRPERY | 200 |
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