fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17600 IAA31 indole-3-acetic acid inducible 31 (.1)

>AT3G17600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 415
NdeI CA|TATG 371
SalI G|TCGAC 43
StyI C|C[AT][AT]GG 415
XbaI T|CTAGA 157


Click here to view TAIR data

>AT3G17600.1 length:477
ATGGAGGTCT CTAACTCTTG TTCTTCATTT TCTTCATCCT CTGTCGACAG 
50
TACTAAACCT TCTCCTTCTG AATCTTCTGT TAATCTCTCC CTTAGTCTCA 
100
CATTTCCTTC TACTTCTCCA CAAAGAGAAG CAAGACAAGA TTGGCCACCG 
150
ATAAAGTCTA GATTAAGAGA TACACTAAAG GGTCGTCGTC TTCTTCGTCG 
200
TGGTGATGAC ACTTCTCTCT TTGTTAAGGT TTATATGGAA GGTGTTCCCA 
250
TTGGAAGAAA ACTCGACCTT TGCGTATTCT CAGGCTACGA GAGTCTATTA 
300
GAAAATCTCT CTCACATGTT CGATACTTCA ATCATCTGCG GTAATCGAGA 
350
TCGAAAACAT CATGTTTTGA CATATGAAGA CAAGGATGGA GATTGGATGA 
400
TGGTCGGAGA TATTCCATGG GATATGTTTC TTGAAACCGT GAGAAGACTA 
450
AAGATCACGA GACCGGAGAG GTATTAA
500

>AT3G17600.1 longest ORF length:158
MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP 
50
IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL 
100
ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL 
150
KITRPERY
200