fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17609 HYH HY5-homolog (.1.2.3.4)

>AT3G17609.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
PstI CTGCA|G 62
PvuII CAG|CTG 65
XhoI C|TCGAG 27


Click here to view TAIR data

>AT3G17609.1 length:408
ATGTCTCTCC AACGACCCAA TGGGAACTCG AGTTCGTCTT CTTCCCACAA 
50
GAAGCACAAA ACTGCAGCTG GATCAACATG TGTTCTAAGC AGCAGCGCCG 
100
ACGATGGAGT CAACAATCCG GAGCTTGACC AGACTCAAAA TGGAGTCTCT 
150
ACAGCTAAAC GCCGCCGTGG AAGAAACCCT GTTGATAAAG AATATAGAAG 
200
CCTCAAGAGA TTATTGAGGA ACAGAGTATC AGCGCAACAA GCAAGAGAGA 
250
GGAAGAAAGT GTATGTGAGT GATTTGGAAT CAAGAGCTAA TGAGTTACAG 
300
AACAACAATG ACCAGCTCGA AGAGAAGATT TCTACTTTGA CGAACGAGAA 
350
CACAATGCTT CGTAAAATGC TTATTAACAC AAGGCCTAAA ACTGATGACA 
400
ATCACTAA
450

>AT3G17609.1 longest ORF length:135
MSLQRPNGNS SSSSSHKKHK TAAGSTCVLS SSADDGVNNP ELDQTQNGVS 
50
TAKRRRGRNP VDKEYRSLKR LLRNRVSAQQ ARERKKVYVS DLESRANELQ 
100
NNNDQLEEKI STLTNENTML RKMLINTRPK TDDNH
150