fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17609 HYH HY5-homolog (.1.2.3.4)

>AT3G17609.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
PvuII CAG|CTG 107
XhoI C|TCGAG 27


Click here to view TAIR data

>AT3G17609.2 length:450
ATGTCTCTCC AACGACCCAA TGGGAACTCG AGTTCGTCTT CTTCCCACAA 
50
GAAGCACAAA ACTGAGGAAA GTGATGAGGA GTTGTTGATG GTTCCTGACA 
100
TGGAAGCAGC TGGATCAACA TGTGTTCTAA GCAGCAGCGC CGACGATGGA 
150
GTCAACAATC CGGAGCTTGA CCAGACTCAA AATGGAGTCT CTACAGCTAA 
200
ACGCCGCCGT GGAAGAAACC CTGTTGATAA AGAATATAGA AGCCTCAAGA 
250
GATTATTGAG GAACAGAGTA TCAGCGCAAC AAGCAAGAGA GAGGAAGAAA 
300
GTGTATGTGA GTGATTTGGA ATCAAGAGCT AATGAGTTAC AGAACAACAA 
350
TGACCAGCTC GAAGAGAAGA TTTCTACTTT GACGAACGAG AACACAATGC 
400
TTCGTAAAAT GCTTATTAAC ACAAGGCCTA AAACTGATGA CAATCACTAA 
450

>AT3G17609.2 longest ORF length:149
MSLQRPNGNS SSSSSHKKHK TEESDEELLM VPDMEAAGST CVLSSSADDG 
50
VNNPELDQTQ NGVSTAKRRR GRNPVDKEYR SLKRLLRNRV SAQQARERKK 
100
VYVSDLESRA NELQNNNDQL EEKISTLTNE NTMLRKMLIN TRPKTDDNH
150