fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17609 HYH HY5-homolog (.1.2.3.4)

>AT3G17609.3 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
PvuII CAG|CTG 20


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>AT3G17609.3 length:363
ATGGTTCCTG ACATGGAAGC AGCTGGATCA ACATGTGTTC TAAGCAGCAG 
50
CGCCGACGAT GGAGTCAACA ATCCGGAGCT TGACCAGACT CAAAATGGAG 
100
TCTCTACAGC TAAACGCCGC CGTGGAAGAA ACCCTGTTGA TAAAGAATAT 
150
AGAAGCCTCA AGAGATTATT GAGGAACAGA GTATCAGCGC AACAAGCAAG 
200
AGAGAGGAAG AAAGTGTATG TGAGTGATTT GGAATCAAGA GCTAATGAGT 
250
TACAGAACAA CAATGACCAG CTCGAAGAGA AGATTTCTAC TTTGACGAAC 
300
GAGAACACAA TGCTTCGTAA AATGCTTATT AACACAAGGC CTAAAACTGA 
350
TGACAATCAC TAA
400

>AT3G17609.3 longest ORF length:120
MVPDMEAAGS TCVLSSSADD GVNNPELDQT QNGVSTAKRR RGRNPVDKEY 
50
RSLKRLLRNR VSAQQARERK KVYVSDLESR ANELQNNNDQ LEEKISTLTN 
100
ENTMLRKMLI NTRPKTDDNH 
150