fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17609 HYH HY5-homolog (.1.2.3.4)

>AT3G17609.4 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
XhoI C|TCGAG 27


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>AT3G17609.4 length:405
ATGTCTCTCC AACGACCCAA TGGGAACTCG AGTTCGTCTT CTTCCCACAA 
50
GAAGCACAAA ACTGCTGGAT CAACATGTGT TCTAAGCAGC AGCGCCGACG 
100
ATGGAGTCAA CAATCCGGAG CTTGACCAGA CTCAAAATGG AGTCTCTACA 
150
GCTAAACGCC GCCGTGGAAG AAACCCTGTT GATAAAGAAT ATAGAAGCCT 
200
CAAGAGATTA TTGAGGAACA GAGTATCAGC GCAACAAGCA AGAGAGAGGA 
250
AGAAAGTGTA TGTGAGTGAT TTGGAATCAA GAGCTAATGA GTTACAGAAC 
300
AACAATGACC AGCTCGAAGA GAAGATTTCT ACTTTGACGA ACGAGAACAC 
350
AATGCTTCGT AAAATGCTTA TTAACACAAG GCCTAAAACT GATGACAATC 
400
ACTAA
450

>AT3G17609.4 longest ORF length:134
MSLQRPNGNS SSSSSHKKHK TAGSTCVLSS SADDGVNNPE LDQTQNGVST 
50
AKRRRGRNPV DKEYRSLKRL LRNRVSAQQA RERKKVYVSD LESRANELQN 
100
NNDQLEEKIS TLTNENTMLR KMLINTRPKT DDNH
150