fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17730 ANAC057 NAC domain containing protein 57 (.1)

>AT3G17730.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 362
NcoI C|CATGG 142
SacI GAGCT|C 350
StyI C|C[AT][AT]GG 142


Click here to view TAIR data

>AT3G17730.1 length:741
ATGGCTCCAG TCGGATTACC TCCAGGCTTT AGATTTCATC CGACTGACGA 
50
AGAACTCGTA AACTATTATC TGAAAAGAAA GATCAACGGT CAAGAAATCG 
100
AGCTTGATAT AATTCCCGAG GTTGATCTCT ACAAATGCGA GCCATGGGAC 
150
CTCGCAGAGA AGTCGTTTCT ACCAAGTAGA GATCCGGAGT GGTATTTTTT 
200
TGGGCCACGT GACCGGAAGT ATCCGAACGG GTTTAGGACG AACCGAGCAA 
250
CGAGAGGTGG GTACTGGAAA TCGACCGGCA AAGATCGGAG AGTGACAAGT 
300
CAAAGCAGAG CGATTGGGAT GAAAAAGACT TTGGTTTATT ATAAAGGAAG 
350
AGCTCCTCAA GGGATCCGTA CGGATTGGGT TATGCATGAG TATCGTCTCG 
400
ATGATAAGGA TTGTGACGAT CCCTCTTCGC TCCAGGACTC GTATGCATTG 
450
TGTCGGGTAT TCAAAAAGAA CGGAATATGT TCGGAGTTGG AATCAGAACG 
500
GCAATTGCAA ACGGGACAAT GTAGCTTCAC AACGGCGTCA ATGGAGGAGA 
550
TCAATTCGAA TAACAACAAC AATTATAATA ATGATTATGA GACAATGTCG 
600
CCGGAGGTGG GAGTTTCCTC CGCCTGCGTT GAAGAAGTAG TCGATGATAA 
650
AGACGATTCG TGGATGCAGT TTATAACAGA TGACGCATGG GACACGTCAT 
700
CAAATGGTGC AGCTATGGGA CATGGTCAAG GGGTTTATTG A
750

>AT3G17730.1 longest ORF length:246
MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD 
50
LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS 
100
QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL 
150
CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS 
200
PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY
250