fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17860 TIFY6B, JAI3, JAZ3 JASMONATE-INSENSITIVE 3, jasmonate-zim-domain protein 3 (.1.2.3)

>AT3G17860.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 835
BglII A|GATCT 499
HindIII A|AGCTT 387
NheI G|CTAGC 609
XbaI T|CTAGA 73


Click here to view TAIR data

>AT3G17860.1 length:1059
ATGGAGAGAG ATTTTCTCGG GTTGGGTTCG AAAAATTCTC CGATCACTGT 
50
CAAGGAGGAA ACCAGCGAAA GCTCTAGAGA TTCAGCTCCC AACAGAGGAA 
100
TGAACTGGTC TTTCTCAAAC AAAGTATCAG CTTCTTCTTC TCAGTTTCTA 
150
TCCTTCAGGC CAACTCAAGA AGATAGACAT AGAAAGTCTG GAAATTATCA 
200
TCTTCCTCAC TCTGGTTCCT TCATGCCATC ATCAGTAGCT GATGTTTATG 
250
ATTCAACCCG CAAAGCTCCT TACAGTTCTG TACAGGGAGT GAGGATGTTC 
300
CCTAATTCCA ATCAACACGA AGAAACTAAC GCAGTTTCCA TGTCGATGCC 
350
GGGTTTCCAG TCTCATCATT ATGCACCAGG AGGAAGAAGC TTCATGAACA 
400
ATAACAATAA CTCACAACCT TTGGTAGGAG TTCCTATCAT GGCACCTCCA 
450
ATTTCAATCC TTCCTCCTCC AGGTTCCATT GTAGGGACTA CTGATATTAG 
500
ATCTTCTTCC AAGCCAATAG GTTCACCTGC GCAGTTGACG ATCTTTTATG 
550
CCGGTTCAGT TTGTGTTTAC GATGACATAT CTCCTGAAAA GGCAAAGGCG 
600
ATAATGTTGC TAGCTGGGAA CGGTTCCTCT ATGCCTCAAG TCTTTTCGCC 
650
GCCTCAAACT CATCAACAAG TGGTCCATCA TACTCGTGCC TCTGTCGATT 
700
CTTCAGCTAT GCCTCCTAGC TTCATGCCTA CAATATCTTA TCTTAGCCCT 
750
GAAGCTGGAA GTAGCACAAA CGGACTCGGA GCCACAAAAG CGACAAGAGG 
800
CTTGACGTCA ACATATCACA ACAACCAAGC TAATGGATCC AATATTAACT 
850
GCCCAGTACC AGTTTCTTGT TCTACCAATG TAATGGCTCC AACAGTGGCA 
900
TTACCTCTGG CTCGCAAAGC ATCCCTGGCT AGGTTTTTAG AGAAACGCAA 
950
AGAAAGGGTC ACGAGCGTAT CCCCATATTG CTTAGACAAG AAGTCATCGA 
1000
CAGATTGTCG CAGATCAATG TCTGAATGCA TTAGTTCTTC TCTCAGCTCT 
1050
GCAACCTAA
1100

>AT3G17860.1 longest ORF length:352
MERDFLGLGS KNSPITVKEE TSESSRDSAP NRGMNWSFSN KVSASSSQFL 
50
SFRPTQEDRH RKSGNYHLPH SGSFMPSSVA DVYDSTRKAP YSSVQGVRMF 
100
PNSNQHEETN AVSMSMPGFQ SHHYAPGGRS FMNNNNNSQP LVGVPIMAPP 
150
ISILPPPGSI VGTTDIRSSS KPIGSPAQLT IFYAGSVCVY DDISPEKAKA 
200
IMLLAGNGSS MPQVFSPPQT HQQVVHHTRA SVDSSAMPPS FMPTISYLSP 
250
EAGSSTNGLG ATKATRGLTS TYHNNQANGS NINCPVPVSC STNVMAPTVA 
300
LPLARKASLA RFLEKRKERV TSVSPYCLDK KSSTDCRRSM SECISSSLSS 
350
AT
400