Locus |
Common name |
Short description |
AT3G17860 |
TIFY6B, JAI3, JAZ3 |
JASMONATE-INSENSITIVE 3, jasmonate-zim-domain protein 3 (.1.2.3) |
>AT3G17860.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
736 |
BglII
| A|GATCT |
400 |
HindIII
| A|AGCTT |
288 |
NheI
| G|CTAGC |
510 |
Click here to view TAIR data
>AT3G17860.3 length:960
ATGAACTGGT CTTTCTCAAA CAAAGTATCA GCTTCTTCTT CTCAGTTTCT | 50 |
ATCCTTCAGG CCAACTCAAG AAGATAGACA TAGAAAGTCT GGAAATTATC | 100 |
ATCTTCCTCA CTCTGGTTCC TTCATGCCAT CATCAGTAGC TGATGTTTAT | 150 |
GATTCAACCC GCAAAGCTCC TTACAGTTCT GTACAGGGAG TGAGGATGTT | 200 |
CCCTAATTCC AATCAACACG AAGAAACTAA CGCAGTTTCC ATGTCGATGC | 250 |
CGGGTTTCCA GTCTCATCAT TATGCACCAG GAGGAAGAAG CTTCATGAAC | 300 |
AATAACAATA ACTCACAACC TTTGGTAGGA GTTCCTATCA TGGCACCTCC | 350 |
AATTTCAATC CTTCCTCCTC CAGGTTCCAT TGTAGGGACT ACTGATATTA | 400 |
GATCTTCTTC CAAGCCAATA GGTTCACCTG CGCAGTTGAC GATCTTTTAT | 450 |
GCCGGTTCAG TTTGTGTTTA CGATGACATA TCTCCTGAAA AGGCAAAGGC | 500 |
GATAATGTTG CTAGCTGGGA ACGGTTCCTC TATGCCTCAA GTCTTTTCGC | 550 |
CGCCTCAAAC TCATCAACAA GTGGTCCATC ATACTCGTGC CTCTGTCGAT | 600 |
TCTTCAGCTA TGCCTCCTAG CTTCATGCCT ACAATATCTT ATCTTAGCCC | 650 |
TGAAGCTGGA AGTAGCACAA ACGGACTCGG AGCCACAAAA GCGACAAGAG | 700 |
GCTTGACGTC AACATATCAC AACAACCAAG CTAATGGATC CAATATTAAC | 750 |
TGCCCAGTAC CAGTTTCTTG TTCTACCAAT GTAATGGCTC CAACAGTGGC | 800 |
ATTACCTCTG GCTCGCAAAG CATCCCTGGC TAGGTTTTTA GAGAAACGCA | 850 |
AAGAAAGGGT CACGAGCGTA TCCCCATATT GCTTAGACAA GAAGTCATCG | 900 |
ACAGATTGTC GCAGATCAAT GTCTGAATGC ATTAGTTCTT CTCTCAGCTC | 950 |
TGCAACCTAA | 1000 |
>AT3G17860.3 longest ORF length:319
MNWSFSNKVS ASSSQFLSFR PTQEDRHRKS GNYHLPHSGS FMPSSVADVY | 50 |
DSTRKAPYSS VQGVRMFPNS NQHEETNAVS MSMPGFQSHH YAPGGRSFMN | 100 |
NNNNSQPLVG VPIMAPPISI LPPPGSIVGT TDIRSSSKPI GSPAQLTIFY | 150 |
AGSVCVYDDI SPEKAKAIML LAGNGSSMPQ VFSPPQTHQQ VVHHTRASVD | 200 |
SSAMPPSFMP TISYLSPEAG SSTNGLGATK ATRGLTSTYH NNQANGSNIN | 250 |
CPVPVSCSTN VMAPTVALPL ARKASLARFL EKRKERVTSV SPYCLDKKSS | 300 |
TDCRRSMSEC ISSSLSSAT | 350 |
|