fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G17860 TIFY6B, JAI3, JAZ3 JASMONATE-INSENSITIVE 3, jasmonate-zim-domain protein 3 (.1.2.3)

>AT3G17860.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 736
BglII A|GATCT 400
HindIII A|AGCTT 288
NheI G|CTAGC 510


Click here to view TAIR data

>AT3G17860.3 length:960
ATGAACTGGT CTTTCTCAAA CAAAGTATCA GCTTCTTCTT CTCAGTTTCT 
50
ATCCTTCAGG CCAACTCAAG AAGATAGACA TAGAAAGTCT GGAAATTATC 
100
ATCTTCCTCA CTCTGGTTCC TTCATGCCAT CATCAGTAGC TGATGTTTAT 
150
GATTCAACCC GCAAAGCTCC TTACAGTTCT GTACAGGGAG TGAGGATGTT 
200
CCCTAATTCC AATCAACACG AAGAAACTAA CGCAGTTTCC ATGTCGATGC 
250
CGGGTTTCCA GTCTCATCAT TATGCACCAG GAGGAAGAAG CTTCATGAAC 
300
AATAACAATA ACTCACAACC TTTGGTAGGA GTTCCTATCA TGGCACCTCC 
350
AATTTCAATC CTTCCTCCTC CAGGTTCCAT TGTAGGGACT ACTGATATTA 
400
GATCTTCTTC CAAGCCAATA GGTTCACCTG CGCAGTTGAC GATCTTTTAT 
450
GCCGGTTCAG TTTGTGTTTA CGATGACATA TCTCCTGAAA AGGCAAAGGC 
500
GATAATGTTG CTAGCTGGGA ACGGTTCCTC TATGCCTCAA GTCTTTTCGC 
550
CGCCTCAAAC TCATCAACAA GTGGTCCATC ATACTCGTGC CTCTGTCGAT 
600
TCTTCAGCTA TGCCTCCTAG CTTCATGCCT ACAATATCTT ATCTTAGCCC 
650
TGAAGCTGGA AGTAGCACAA ACGGACTCGG AGCCACAAAA GCGACAAGAG 
700
GCTTGACGTC AACATATCAC AACAACCAAG CTAATGGATC CAATATTAAC 
750
TGCCCAGTAC CAGTTTCTTG TTCTACCAAT GTAATGGCTC CAACAGTGGC 
800
ATTACCTCTG GCTCGCAAAG CATCCCTGGC TAGGTTTTTA GAGAAACGCA 
850
AAGAAAGGGT CACGAGCGTA TCCCCATATT GCTTAGACAA GAAGTCATCG 
900
ACAGATTGTC GCAGATCAAT GTCTGAATGC ATTAGTTCTT CTCTCAGCTC 
950
TGCAACCTAA 
1000

>AT3G17860.3 longest ORF length:319
MNWSFSNKVS ASSSQFLSFR PTQEDRHRKS GNYHLPHSGS FMPSSVADVY 
50
DSTRKAPYSS VQGVRMFPNS NQHEETNAVS MSMPGFQSHH YAPGGRSFMN 
100
NNNNSQPLVG VPIMAPPISI LPPPGSIVGT TDIRSSSKPI GSPAQLTIFY 
150
AGSVCVYDDI SPEKAKAIML LAGNGSSMPQ VFSPPQTHQQ VVHHTRASVD 
200
SSAMPPSFMP TISYLSPEAG SSTNGLGATK ATRGLTSTYH NNQANGSNIN 
250
CPVPVSCSTN VMAPTVALPL ARKASLARFL EKRKERVTSV SPYCLDKKSS 
300
TDCRRSMSEC ISSSLSSAT
350