fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G18100 ATMYB4R1 myb domain protein 4r1 (.1.2.3)

>AT3G18100.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 315, 616, 760, 812
HindIII A|AGCTT 170, 822
NdeI CA|TATG 518
PstI CTGCA|G 635, 698, 857, 884, 1865
PvuII CAG|CTG 5
SacI GAGCT|C 660
StyI C|C[AT][AT]GG 1846
XbaI T|CTAGA 1422


Click here to view TAIR data

>AT3G18100.2 length:1905
ATGCCAGCTG CGAGTTCAAG TTTCCCTGAA GCTGCACGAG CGTTTGTTGA 
50
TGCAATCAGG AGAAACAGAG CATATCAGAA ATTTCTTAGA GGAAAATTGG 
100
CAGAAATTGA AGCAACGATC GAGCAGAACG AGAAACACAA GAAAAATGTT 
150
AGAATAGTCA AAGATTTTCA AGCTTCTTGC AAGAGAATTA CTAAACTGGC 
200
ACTCTGTCAG AGGAAAGATC CTCGTGTCGA ATTAATCTCA ACACGGAAAT 
250
CTGGGCCTTG TGATAGCTCC GAGGTAATTG GGCCTTGTGA TAGCTTCGAG 
300
GGTAATGATA AAAAGATATC TCCTTTGACG TTGGGTCCAG CGGAAAACCC 
350
TTGTGTTGAA AATTATAGGA TGGCACTAGA GAAATATCCA ATTTCAGTGA 
400
AACGCAGAAA ATGGTCTACT GAGGAGAACA AAAACCTCGC AAAAGGTTTA 
450
AAACAAGAAG TTCAAAAGAT ACTGCTTTCT GAAGCAATTG AACGGTCCAG 
500
TGACTTGGAA GGAGCTACAT ATGATATAGA CACTATCAAT GAATCGATCG 
550
GAAATCTTGA GATCACACCA GAAATGATTA GGCAGTTTCT TCCGAAAATT 
600
AACTGGGATT CGTTGGATAT CAAGGACCGT TCTGCTGCAG AATGTGAAGC 
650
TCGGTGGATG AGCTCGGAAG ATCCATTGAT TAACCACGGT CCGTGGACTG 
700
CAGCAGAGGA CAAAAACCTA CTCCGAACTA TCGAACAAAC GAGTCTTACA 
750
GACTGGGTTG ATATCGCGGT GTCACTAGGG ACAAATAGGA CCCCATTTCA 
800
ATGTTTGGCT CGATATCAGA GAAGCTTGAA TCCAAGCATA TTGAAAAAAG 
850
AATGGACTGC AGAGGAAGAT GACCAACTTC GTACTGCAGT AGAGTTATTT 
900
GGGGAGAAAG ACTGGCAATC TGTTGCAAAT GTATTAAAAG GAAGAACTGG 
950
AACTCAGTGC TCGAATAGAT GGAAAAAGTC GCTTCGCCCT ACCAGAAAAG 
1000
GGACATGGAG CTTAGAGGAA GACAAACGTG TAAAGGTAGC TGTGACACTC 
1050
TTTGGATCTC AAAACTGGCA TAAAATTTCT CAGTTTGTTC CTGGACGGAC 
1100
TCAGACTCAG TGTCGGGAGA GATGGTTAAA TTGTTTAGAT CCCAAAGTAA 
1150
ATCGTGGGAA GTGGACTGAG GAAGAGGATG AAAAGTTGAG AGAAGCAATT 
1200
GCAGAGCATG GATATAGCTG GTCTAAGGTG GCTACTAATC TGTCATGTCG 
1250
TACTGACAAT CAGTGCTTGA GGAGATGGAA GAGATTATAT CCTCATCAAG 
1300
TGGCTCTTTT ACAAGAAGCT AGAAGGTTAC AAAAAGAAGC TAGTGTAGGT 
1350
AATTTTGTTG ATCGGGAATC AGAGCGTCCT GCTCTTGTCA CAAGCCCTAT 
1400
TTTGGCACTA CCGGATATAT CTCTAGAGCC AGAACCCGAT AGTGTAGCCC 
1450
TGAAGAAGAA ACGCAAAGCC AAGCAGAAGA AGTCAGATGC AGAGAGACAA 
1500
CCAAAGAGAC GGAGAAAAGG ATTAAAGAAC TGCTCAGGAG ATGTATGTAG 
1550
ACAAGAGAAT GAGACTGTTT GTGAAAATGA ACCGAACAAT GGAGGAGAGG 
1600
AAAGGATGTT GGCATTGGAA TGTCATGACG AGATCCAAGA CAATGCAAAG 
1650
GAGAAGCCAA AACAAAGACG CAAAAGTGTT GCAGAAACTG TTTGTGAAAA 
1700
TGAACCAAAC AATGGAGGAG AGGAGAGGAT GTTGGCATTG GAATGTGATA 
1750
ACGAGATCCA AGACAATGCA AAGGAGAAAC GAAAACGAAG ACGCAAAAGT 
1800
GTTGCAGAAA CATCTAACAA CACCACTGGT TTAAAAAAAC TTACGCCTAG 
1850
GAGAAGGAAA ATATCTGCAG TTGTTCCTAT TAAGAACCAA GATGCACCAA 
1900
ATTAG
1950

>AT3G18100.2 longest ORF length:634
MPAASSSFPE AARAFVDAIR RNRAYQKFLR GKLAEIEATI EQNEKHKKNV 
50
RIVKDFQASC KRITKLALCQ RKDPRVELIS TRKSGPCDSS EVIGPCDSFE 
100
GNDKKISPLT LGPAENPCVE NYRMALEKYP ISVKRRKWST EENKNLAKGL 
150
KQEVQKILLS EAIERSSDLE GATYDIDTIN ESIGNLEITP EMIRQFLPKI 
200
NWDSLDIKDR SAAECEARWM SSEDPLINHG PWTAAEDKNL LRTIEQTSLT 
250
DWVDIAVSLG TNRTPFQCLA RYQRSLNPSI LKKEWTAEED DQLRTAVELF 
300
GEKDWQSVAN VLKGRTGTQC SNRWKKSLRP TRKGTWSLEE DKRVKVAVTL 
350
FGSQNWHKIS QFVPGRTQTQ CRERWLNCLD PKVNRGKWTE EEDEKLREAI 
400
AEHGYSWSKV ATNLSCRTDN QCLRRWKRLY PHQVALLQEA RRLQKEASVG 
450
NFVDRESERP ALVTSPILAL PDISLEPEPD SVALKKKRKA KQKKSDAERQ 
500
PKRRRKGLKN CSGDVCRQEN ETVCENEPNN GGEERMLALE CHDEIQDNAK 
550
EKPKQRRKSV AETVCENEPN NGGEERMLAL ECDNEIQDNA KEKRKRRRKS 
600
VAETSNNTTG LKKLTPRRRK ISAVVPIKNQ DAPN
650