Locus |
Common name |
Short description |
AT3G18400 |
ANAC058 |
NAC domain containing protein 58 (.1) |
>AT3G18400.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
582 |
NdeI
| CA|TATG |
936 |
SacI
| GAGCT|C |
49, 341 |
SalI
| G|TCGAC |
112 |
StyI
| C|C[AT][AT]GG |
139, 155, 735 |
Click here to view TAIR data
>AT3G18400.1 length:945
ATGGAAGAAA ATCTTCCTCC GGGGTTCAGA TTTCATCCTA CAGACGAGGA | 50 |
GCTCATAACG CATTATCTAT GTCGGAAAGT CTCCGATATA GGATTCACCG | 100 |
GTAAAGCTGT CGTCGACGTT GATCTCAACA AGTGTGAACC TTGGGATTTG | 150 |
CCAGCCAAGG CTTCAATGGG AGAGAAAGAG TGGTATTTCT TCAGCCAAAG | 200 |
GGATCGGAAA TATCCAACCG GTTTAAGAAC AAACCGGGCA ACAGAAGCTG | 250 |
GTTACTGGAA AACCACCGGG AAAGATAAAG AAATATACCG AAGTGGAGTG | 300 |
TTGGTTGGGA TGAAGAAAAC CCTAGTTTTC TACAAAGGAA GAGCTCCCAA | 350 |
AGGTGAGAAA AGCAATTGGG TTATGCATGA GTACAGGCTT GAGAGCAAAC | 400 |
AACCTTTCAA CCCCACGAAT AAGGAGGAAT GGGTAGTGTG TAGGGTTTTC | 450 |
GAAAAGAGCA CGGCAGCAAA GAAAGCACAA GAACAACAAC CTCAATCTTC | 500 |
TCAACCATCT TTTGGATCTC CATGCGATGC AAACTCATCA ATGGCAAATG | 550 |
AGTTTGAAGA TATTGATGAG CTTCCGAATC TGAATTCAAA CTCATCAACC | 600 |
ATCGATTACA ATAATCATAT CCATCAATAT TCGCAACGCA ATGTTTACTC | 650 |
AGAAGACAAC ACAACAAGTA CGGCTGGTCT CAACATGAAC ATGAACATGG | 700 |
CTAGTACTAA TCTTCAGTCT TGGACAACAA GTCTCCTTGG TCCGCCTTTA | 750 |
TCTCCAATCA ACTCTTTGTT GCTCAAGGCT TTCCAAATCA GGAACTCTTA | 800 |
TAGTTTCCCA AAAGAGATGA TCCCCAGTTT CAATCATTCT TCTCTTCAAC | 850 |
AAGGAGTCTC CAATATGATC CAAAATGCTT CAAGTTCGTC TCAAGTGCAA | 900 |
CCCCAACCGC AAGAGGAAGC GTTTAATATG GACTCCATAT GGTGA | 950 |
>AT3G18400.1 longest ORF length:314
MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL | 50 |
PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV | 100 |
LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF | 150 |
EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST | 200 |
IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL | 250 |
SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ | 300 |
PQPQEEAFNM DSIW | 350 |
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