fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G18960 AP2/B3-like transcriptional factor family protein (.1)

>AT3G18960.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NdeI, NotI, PvuII, SmaI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 415, 4376, 4434, 4987, 5506
EcoRI G|AATTC 3252, 4691, 6556
HindIII A|AGCTT 2562, 2592, 3779, 5328, 6189, 6426
NcoI C|CATGG 5939
NheI G|CTAGC 849, 5713
PacI TTAAT|TAA 1854, 1945, 5111
PstI CTGCA|G 5404
SacI GAGCT|C 2954, 6601
SalI G|TCGAC 3290, 5814
SpeI A|CTAGT 6412
StyI C|C[AT][AT]GG 5939, 6262
XhoI C|TCGAG 2951, 5352


Click here to view TAIR data

>AT3G18960 genomic sequence (4109-4240,4494-4920,4989-5059,) length:6667
agtatctaac tgatttagaa agttcttcta gtttattcga tcttctttgt 
50
aaagagtaac tgcacatatt tgagttacgt tttagacaat attgtttcat 
100
tgtattaaat cattttattt atatcttatt ttatggaatt ttaatactca 
150
gcttttgtta ttttaccatt aatcttttac aagagaaaaa tggaattgaa 
200
gacttgtaat acttacgttt ataggttgat ttgttgaaaa gaaagaagtc 
250
gttgaaaaat gggatgctaa aacttttatg gtgttttcat gaacttatgt 
300
gaaaagtttc actttcgtgg gattaagaag tttggtgcac atttatacat 
350
gtatgaatgc gcattgacat ccaaacactc ccttattatt tctaataaat 
400
tttaaattaa taatagatct tggtttcaag atattaatta caagtacagt 
450
atcagacaaa tttgtttttc cagaagtata aatacaatca gttgttcttg 
500
ccgtatgatt ggttgcatta gtattcgctc tgaaaatatg accattgtta 
550
gtcatgactc gtaagtctaa gtaataaatt gtaacatttt tttttttttt 
600
ttttgtaaca ttaccttata tgattacaga aagaaacaaa attcatggac 
650
gaatgtacga gaatgtgaac agattattat ttagaggcta ataaatggtc 
700
ctatagacta tagtatacaa atgatcaatg actaaaccta taaggctata 
750
accaatactc gttgcttttg caaaaaaatc caaaaaactg ataaaccaca 
800
tcaaacctat aaacctaaac aaagtaccac atagatagat catgtatagc 
850
tagctaaatg agagacctca tgagtttttg ggttatttca tattgatcta 
900
gtaggaaaac taattaataa gaaatttata taagatgaaa tatgttcgta 
950
tgttaggttg atttgttggt tcagacgttc agtttgttgg aaaaagaatt 
1000
agccactgga aaaacggaga ggattgtaat attctatttt tttgtcttca 
1050
agaacgtaag taaaaagtct tctttttcgt tggatatatg tattgctatt 
1100
tctacacatt gacatttgac atatagacat gcacacacca cccttctgtt 
1150
catattttca aatagcacga aaagctgata aatcttgatc tattaagcaa 
1200
tttagaagtt taagagtttg gttaattagt tctaaattgt aaaattcata 
1250
atgataattt taatgacaat gaagttccta aatttaagta gtagaaatat 
1300
gctttgattc gtagaaaaga atctctgtag attgctttta tgtgtattaa 
1350
cccaactata ttaacaatga cgatgtctac agattttcac tataaaattt 
1400
tatttgtcat ttttagtgtg tgtttttttt tgttctcacg agcatttgca 
1450
gtttagtatt ataaaatatt tgactgaaag attgttatgt tttgtaccca 
1500
aacaataata tttttatata taattaaatc tattccgaca attttttttt 
1550
gtctaatcta ttttttaggt ttaagactat cagtttgtag aacagttgtt 
1600
tcacgactaa gtaagaaagg tgcatatata tagcgactca tcaatacata 
1650
aagatgattt actttcatga atagtaatct aaatcccaaa aggaaatcga 
1700
ttagaggctc ggactttggt taataggaaa acatttttga aagacacatt 
1750
gacattcggt tcaaatccgg tttccacgcg ccgtttatat aactaaacgc 
1800
aacatatatc tgaaaataat ttgaattggg tatggtctct gtgtttttct 
1850
cttaattaag gatacaacaa caaacaacga cgttaattat tgtgcgccac 
1900
agtagttagg caaatcccca gtagtttctt gttcatttga atttaattaa 
1950
ttaagaatga ttaaacccat aatcttgact attttattat tcaatgctat 
2000
aattgttata tatatggtag actattatat ataggtcttg ttaagttaat 
2050
cataaatttt cataactcac agcctcaaaa atattaggat atttatagtt 
2100
ttgtcttgag gattaatgta aCCGACCTTA GCTCAGTTGG TAGAGCGGAA 
2150
GACTGTAGgc gttgcagata atctttaggt cgctggttcg attccggcag 
2200
gtcggatttt ttttttttct ttttttcttt tcaactttaa agataaaacc 
2250
cagcccatat taaggctttt agttcaaaaa acctagagca gccgtttata 
2300
attaaataaa atcaataaat gactccacat gcaagattct catttgagac 
2350
agaaactctc caaagcggca cagcttcagc ggcgatttgg agacccaaaa 
2400
gctaagtggc attgggccaa acacaaccga agcctatttg ttcaaaacac 
2450
aaccgaagcc tatttgttca aaacacaacc gaagcctatt tgttcaaaac 
2500
acaaccgaag cctatttgtt caaaacacaa ccgaacaaaa aaaactaaaa 
2550
tgttaaaaag aaagcttcaa ggcaacttcc tcaaaaggag aaagcttcaa 
2600
ggcaaattcc ccaaaagatt tagctgacta tcaggtttga atgtttataa 
2650
tatgatgtag aaagctcaac ctaatgcatc tagcataaat aaggacatca 
2700
cttaatccaa aaccttcaaa gagatggaat aataatcaaa ataaaaactt 
2750
ataagcctaa acaaatattc gaaaattcat tttaaaacat gggaaccttc 
2800
ttaggatatt ttgtgcctgg tctctcactt gcacttctcg gtctctggca 
2850
tgtaatcaat accatacaat cttactctct aaattcccca aaccaaaatt 
2900
tcacctcatg attctggttc cctttcccgt ataacaaaaa actcaaacat 
2950
ctcgagctca tcgtcattat cattgttact ttcttatcca ttttcctcct 
3000
aaactcagat ttccctttcc ttaaaTTATC GTCTTTCAAA CCGGAAATCA 
3050
AACACATCTG CATAGTCTTC CAACTCATTT CGTTTGCGTC TTCCACTCTC 
3100
ATCTTTGACG TAATAAATCc tcccgataag gatatatacc ggtttcatcg 
3150
ggcttcatgc aacattggtt ttcatgcaag aagtactctt ctttcttgat 
3200
tctcactcca ctgatcactt aggtcttgaa ggccagtacC ATGTCCTCCT 
3250
CGAATTCGCT GCCTTCGTCT CCTTCTCTTC AGCTCTTGCG TCGACCATtt 
3300
accctaaatc tttttatgcg tctcttgtgt tctcggcctc gctcatgttt 
3350
caaggatgct ggttcttgaa catggggtta atgtttttag atccaaatta 
3400
tgtccatata ggggttgctt gagaaccacg accgatacac caagaagtaa 
3450
caacagtact attgttgatc atagtgggct ggtttgagag tctccttgta 
3500
cagaaattat ggcacaagcg ttagcgaatc ttcagtttag ctggatttta 
3550
tcagctatat tgatttttac atttgtattc tctctcaaaa gtttcgggga 
3600
aagtcgccgt gtttcccaat tgccggtcgt caacgttaga atacgaacgt 
3650
aattttcgac gaggaggtga tcgttctact gtcgtggaag cctcgacgaa 
3700
tccttttcga gaatatattt cgtctcgttt atattaatgt tgtaatagta 
3750
tagaaaatat attttgttat cggtaggtaa gcttttacta tttgatgtaa 
3800
ctagcctttg attgttatga catgtagcaa cgaattatac attggttatt 
3850
gataaaagcg tatttccatg atattttttt taatttatat acaaggttta 
3900
tactggtata acttcaataa tggtaagact tatcttttga ctagagaact 
3950
gtataaaatg agtcttggaa aacgacatag agttaaagca actttgtcac 
4000
tcttgtcaga taaaaactta tcggtttctc ttttccggct ttaactctcc 
4050
actcatcact ctccactctc aattttcacc ttctcttctc tgaacaaggc 
4100
aaacaaaaAT GGTTACAACC CAAAACACGA AGGCCAGAGT CACCTCCGTC 
4150
TCTCACCGCC GATCACAGCA AGATCCTGAG TCGCCGGTGA AGAAGTTCTT 
4200
CAAGTTGGTC TTACCTTCAA CGATGAAGGA TAAGATGATG gtaattactt 
4250
aacacttaga aaaaacttga aataaagtgt ttgcatgtgt gttgttatcc 
4300
ctgtttcaat ttctagggac tatatctgaa gattcactaa acagtgtcca 
4350
tttcttttgt tttatcttgg actagagatc taaaagggat acactaatct 
4400
gatcatttgt tcttaagaaa tgtagagaat ttaagatctg acattttgtt 
4450
acttgtttct gaaaatctca ttatgttgaa taactttgag cagAAGATTC 
4500
CGCCAAGATT CGTGAAGCTA CAAGGGTCTA AACTCTCAGA GGTTGTTACA 
4550
TTAGAGACTC CTGCGGGTTT CAAGCGTTCC ATTAAGCTCA AACGGATCGG 
4600
TGAAGAGATT TGGTTCCATG AGGGTTGGAG TGAGTTTGCA GAGGCTCATT 
4650
CCATCGAGGA AGGCCACTTT CTCTTGTTCG AATACAAGGA GAATTCGAGT 
4700
TTCCGTGTAA TAATCTTCAA TGTTTCGGCT TGCGAGACCA AATATCCACT 
4750
GGATGCAGTT CATATCATTG ACAGCGACGA TGATATAATC GATATTACAG 
4800
GCAAAGAGTT TGTTGGAACT CAAGGTACAA GGAAGAATAA TCAATCTGTT 
4850
AATGGTGGTG ATACAGAGCA CAAATCCAAG AAGAGATCAA GAGACATCGA 
4900
ACTTGACAAG ATTCTACACG gtaagaagac tttgttctta atatagatta 
4950
agaagattgg gatctgaata tttttaatct atgtgtagAT CTTGATGTGA 
5000
TGAATCCAAT GCATGTGCTT AAAGAAGAAG AAGAAGACAA GAGAGTCTTC 
5050
AGGGGATAAc agagctttta acagaaccga gacctgcaag tttatttgtt 
5100
gtgtaatgtt aattaatgac ttgatgaaac taaaaaactt tcattgcaaa 
5150
atgagtagtg ttttgaatcc tgacctgtaa caagctatgT TAAACAAAAC 
5200
TGTAACCAGG TCTTGTTTTG ATTCTTCTTT CTTTCATCTC CTTCCTCAGC 
5250
TTCTCTACCT CTACCCATTT CCCTTTATGA GCTAACACAT TCGATAAAGC 
5300
GACATAATCT TCGCACTCAG AACCCGAAAG CTTCTCGTCC TCTCGTTCTA 
5350
TCTCGAGAAG AGCCTTTCCG ATCTCTTCAC CCATTACAGT CTCTCCATAA 
5400
ATGCTGCAGG CATTGCAGAG GCTTCTTAAC AAGATAGCGT CAGGCTTTAT 
5450
AGGCATAGCT AATATAAACT GATAAGCCTC TTGTATCCGC CCTGCCTTAC 
5500
CAAGAAGATC TACTATGCAA CCATAGTGTT CGATAACCGG TGTGACACCA 
5550
AATCTTGTCT TCATGCTCTT GAACAGCTCG ATTCCTTCTT CAACAAGACC 
5600
TATATGACGA TAAGCCGAAA GCAAGCTAGT GAAAGTTATT TCGTTTGGTT 
5650
TGATCCCAGA TTCCGCCATT CGGTTTAGAA GATTCGGTGT TTCGTTTCCT 
5700
CTACCGTTGA GAGCTAGCCC CGTTGCCATT GAAGTCCATG TAAAGACATT 
5750
TTTCACTTTC ATTAGCTCGA ACACGGAGAA TGCGTTGTTC AAGCAGCCGC 
5800
ATTTTGAGTA CATGTCGACA AGTGCAGTAC CGATAAAGAC ATCAACTTCG 
5850
GGTGTGAACC CGAGCTTTTC TATGTAACCA TGAACGAGAG AACCAATTTC 
5900
GAGCAAACCC GTCTGAGAAA TGGCTGAAAG AACACAAACC ATGGTTGTAT 
5950
CAGTAGGTCT AACTCCACTA CCACAGCAAG AGAATCTCCT AAACAAAACC 
6000
ATAGCCTTTC TCGCATTGTG ATTGCCTTTA TCCTTATGTG AACAATATCC 
6050
ACCTATCATT GCGTTCCATG TAACAGAGGT TCTCTCAGGC ATTTCGTCAA 
6100
ACACCTTCCT TGCATAACGT AAATCTCCAT TCTTAGCGTA GAAATGGAGT 
6150
AAAGTGGTTC CAATCAATTC AGATTCATAT AGAAAGCCAA GCTTTTTCAC 
6200
CATCCCATGA ACAATTCTAC CAACCCGTAA CGCCGACGAC GAAGCTGACC 
6250
TAGCACAAGC GCCAAGGACG AAGACAAAAG TGCGCTCATT GAGATAAAGC 
6300
AACGAACTTT TTGATGCATA ATTGGCAAAA ATCCGAATCG AGTCCTCTGG 
6350
TTTGCTACAT TTAAGCAATG TGTTGAAGAG AAACTTATCA GGATGACCAA 
6400
ATCGAGGAAA CACTAGTAAA TGAGCAAGCT TTGAGCTGCT TTCGGTTGAT 
6450
GGCTTTGAAC AGTAATGGCC TATGAGTTTG CCAAATAGAG AATTATCATG 
6500
GCAGCCATTG ATGACTAATT GAGCATGGAT TTGCTTAGCT TGAATTAGGG 
6550
TTTTCGAATT CTGTTGCAAC AAGGACAAAA ATCTTGGTCC TGGAAAAACA 
6600
GAGCTCATaa gcaccaaact ctgatactgt aatggattaa ggcaaagaga 
6650
aggagaaaca aaagcta
6700