fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G18990 REM39, VRN1 REDUCED VERNALIZATION RESPONSE 1, REPRODUCTIVE MERISTEM 39, AP2/B3-like transcriptional factor family protein (.1)

>AT3G18990.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 913
PstI CTGCA|G 668
XbaI T|CTAGA 921


Click here to view TAIR data

>AT3G18990.1 length:1026
ATGCCACGCC CTTTCTTCCA TAAGTTGATT TTCTCATCCA CTATCCAAGA 
50
AAAACGTCTG AGGGTCCCAG ATAAGTTTGT GAGTAAATTC AAGGATGAGC 
100
TTTCGGTTGC TGTTGCACTC ACAGTACCTG ATGGTCATGT TTGGCGTGTA 
150
GGACTAAGGA AAGCTGACAA CAAAATTTGG TTTCAAGATG GTTGGCAAGA 
200
GTTTGTTGAC CGTTACTCCA TTCGCATTGG TTATCTTTTG ATTTTTAGAT 
250
ATGAAGGAAA CTCTGCCTTC AGCGTCTACA TTTTCAATTT ATCCCACTCT 
300
GAGATCAATT ACCATTCCAC CGGTCTCATG GATTCCGCTC ACAACCACTT 
350
CAAACGCGCC CGTTTGTTTG AAGACCTTGA AGATGAAGAT GCCGAGGTCA 
400
TCTTTCCTTC TTCTGTGTAC CCATCACCAC TTCCTGAGTC TACAGTACCA 
450
GCCAACAAAG GGTATGCTAG TTCAGCCATC CAAACCTTGT TCACTGGACC 
500
AGTTAAAGCT GAAGAGCCAA CGCCAACCCC AAAAATACCT AAAAAGAGAG 
550
GGAGGAAGAA GAAAAATGCT GATCCTGAGG AAATAAACTC ATCAGCTCCG 
600
CGAGATGATG ATCCAGAGAA CCGTTCAAAG TTCTACGAGA GTGCTTCTGC 
650
GAGAAAGAGA ACCGTGACTG CAGAAGAAAG AGAGAGAGCC ATCAATGCAG 
700
CCAAAACGTT CGAACCAACA AACCCTTTCT TCAGAGTGGT TCTGCGACCA 
750
TCCTATCTAT ACAGAGGTTG CATCATGTAT CTTCCTTCTG GGTTTGCTGA 
800
GAAGTACCTA AGTGGGATCT CCGGGTTCAT CAAAGTCCAG CTTGCGGAGA 
850
AACAATGGCC TGTTCGATGT CTCTACAAAG CCGGGAGAGC CAAATTCAGT 
900
CAAGGATGGT ACGAATTCAC TCTAGAGAAC AACTTAGGAG AAGGAGACGT 
950
CTGTGTGTTT GAGCTGCTCA GAACCAGAGA TTTCGTTTTG AAAGTGACAG 
1000
CCTTTCGAGT CAACGAGTAC GTCTGA
1050

>AT3G18990.1 longest ORF length:341
MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV 
50
GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS 
100
EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP 
150
ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP 
200
RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP 
250
SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS 
300
QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
350