fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G19500 bHLH113 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G19500.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, EcoRV, NdeI, NotI, PstI, SmaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 750, 1335
BglII A|GATCT 687, 1762
EcoRI G|AATTC 511
HindIII A|AGCTT 4968, 5898, 6605
HpaI GTT|AAC 2480
KpnI GGTAC|C 2468, 2633
NcoI C|CATGG 2176
NheI G|CTAGC 2764
PacI TTAAT|TAA 5650
PvuII CAG|CTG 95, 7415
SacI GAGCT|C 7010
SalI G|TCGAC 1490
SpeI A|CTAGT 3390, 5734, 6232, 6555
StyI C|C[AT][AT]GG 777, 2176
XbaI T|CTAGA 3443


Click here to view TAIR data

>AT3G19500 genomic sequence (4047-4403,4501-4605,4741-4806,5284-5385,5469-5651,) length:7423
CAATACTGTC TTGAACCACC TCTGCGGAAA GAAGATAgta atattctctg 
50
cctacgtact tggtagtgtt ttaagcagtt cttgctggta tctacagctg 
100
tcttttttgt tggttttaat ttttgtagTT CCTCCGGATG ATGAGGGTTG 
150
GCTATGCCCC GGATGTGATT GCAAAGATGA CAGCTTGGAC TTGCTTAATG 
200
ATTCTTTAGG GACAAAATTT TCGGTCAGCG ACAGTTGGGA Ggtatataac 
250
tatatatgtt gaggttttta ttgttaaaga ggagaaaaca cttaaaaaca 
300
cacctgcctt gaacttttgt gtagAAAATA TTTCCTGAGG CAGCAGCAGC 
350
GCTGGTTGGT GGAGGTCAAA ATCTTGACTG TGATCTTCCT TCAGATGATT 
400
CTGATGATGA AGAGTATGAT CCAGATTGTT TGAATGATAA TGAAAATGAT 
450
GAAGATGGCA GTGATGACAA TGAAGAATCT GAGAACGAAG ATGGTAGTTC 
500
TGATGAAACT GAATTCACAT CTGCATCTGA CGAAATGATT GAGTCATTTA 
550
AAGAAGGGAA AGATATAATG AAAGATGTAA TGGCCCTTCC ATCTGATGAT 
600
TCTGAGGATG ATGACTATGA TCCTGATGCC CCGACTTGTG ATGATGATAA 
650
AGAAAGTTCA AATTCTGATT GTACATCAGA CACTGAAGAT CTTGAAACTT 
700
CCTTCAAAGG AGATGAGACT AATCAGCAAG CTGAAGATAC ACCACTTGAG 
750
GATCCTGGCA GACAGACGTC TCAGCTCCAA GGTGATGCAA TTTTAGAGTC 
800
AGATGTTGGG CTTGATGATG GTCCTGCCGG TGTATCCAGA AGGAGGAATG 
850
TTGAAAGGCT GGATTACAAA AAGTTGTATG ATgtgagtga tctctctttt 
900
tcttgataat cgatttctat ctggctttgg aaaaacctct gaatggtatt 
950
tttcttctat gtgcagGAGG AATATGACAA TGTTCCGACT TCGTCAAGTG 
1000
ATGATGACGA TTGGGATAAA ACTGCAAGAA TGGGAAAAGA AGATTCCGAG 
1050
TCGGAAGATG AAGGGGACAC TGTACCTCTG AAACAGTCTT CAAATGCAGA 
1100
AGATCATACT TCTAAGAAAC TTATACGGAA GTCGAAAAGG GCAGATAAAA 
1150
AGGATACCTT AGAAATGCCA CAAGAAGGTC CTGGAGAAAA TGGTGGTTCT 
1200
GGTGAAATTG AAAAAAGCAG CTCTTCAGCA TGTAAACAGA CAGATCCCAA 
1250
AACTCAGgta aaaagatata gctgtcttga ggctttaagg tgccaatctt 
1300
acattattat gagggaggga gcaatggatt gaaaggatcc ctcttttatg 
1350
cagAGACTGT ACATATCTTT TCAAGAGAAT CAATATCCAG ACAAAGCCAC 
1400
GAAGGAGAGC TTAGCCAAAG AGCTACAAAT GACAGTTAAG CAAgtaagaa 
1450
gtttctccta gtaaattgtt tgtttagttc tcccttttag tcgacctagt 
1500
ttcatctctg ctaagaactg attatgttct gtagGTTAAT AACTGGTTTA 
1550
AGCATAGGCG TTGGTCGATA AACAGCAAAC CTTTAGTTTC AGAGGAAAAT 
1600
GTCGAGAAGT TAAAAACAGG CAAGGAAGGT GAATGTGAGA CATCTGTTGC 
1650
TGGAAGTAGC AAACAAACTA TGGAAACCGA GTCAGTTGCA GAGAAACCAA 
1700
CCAATACTGG ATCACGGAAA AGAAGAAGAA AGTAGacttt agattcaatc 
1750
atgaaggttt tagatctaat gcaaggacaa tactggaaca catacttacc 
1800
caaaccccga gatatgaaga caccaaaccc tgcaaagcat cgggtttgtt 
1850
cagttctttg tttcacattt ttggggtact ttgaagacct tgaaatttga 
1900
ggcaaaagaa agaaagaaag attttcttcg aaattggatg ataggttcat 
1950
ttttaacagt taaagaagtt aaggctttgt gttatgatta tgaaagtttt 
2000
tgtttatttc catctggaga gatgttttga gttatggttt ctgtaatcga 
2050
tagagaccgg tttaagagat caagagattt aaactttaaa agtcttgttt 
2100
gaaccggttt taaaccctca aatgtgaacg tttaaccggt ctgtaattgc 
2150
ttattattaa aggcccatta agagcccatg gatgtttatg atacagtatt 
2200
agagtcctag aattgggtaa cgtgttgcag aaggtaaacg aaaATGAAGA 
2250
AGGTGCTGAG AGTATACGGC GGCGTTATGA GGCTGGTGAG ACTTTTGCCG 
2300
GCGGATTCAA GGCCGTATTA CGCCAAGTAC GCCAGGGAGA ATTTCGTTAA 
2350
TTACCGTGAA GTCGATCAAA GCGAAACATC CCTCGACGAA CTCTTCCAGC 
2400
GAGCCTATAA TCACTCACTT TGGGTACTCA AGAAGgtaac aaagattctg 
2450
ggtttctttt aaatctaggt accctttgtg ttaactgtct gttctcaatc 
2500
atttgcagTA CTCAATTGAC GAATCAGCAG CGACGAAGTT GAAAGAGATT 
2550
TGTTTTGAAT AAtaacgcac accaagtgtt cgacgttatg tccctgagag 
2600
tgttggaaca agtttggacg atttgttaaa tgggtaccat cagttttcta 
2650
cttttgatag ctatatcaag aacaggggtt gttcatgtgt ctttgtcttt 
2700
cctttttagt tgtcttgact ttctgtgatt gactgctgaa ttggtcgttg 
2750
tcttgtttga gtagctagct tcttgtttgt ttccatgatc ctgaataaaa 
2800
ttgttacatt cttagattcg aaaacatcac attacttaat ctcatctttg 
2850
gtaatgaaag aaactcatca gagcaaagta gaagtggcag ttaagtaata 
2900
acgagagaga aagattaggg attgtttggg taattaaagt gatatatatg 
2950
tagctaaggg acaataaaca gtagctaaga gtttaggtcc ttgtcgaaaa 
3000
ctcgaaaatc ttatatgaaa ccaacctaac caaaaccaaa gtctttttga 
3050
gattgttttt gcttctggag ttaaaagtag aagctagaga gaaaagttgg 
3100
actacttaat aatctttatg attttttttt gacctttcct cttatggatt 
3150
tattttagtg gtttgccaac ttgtggagtt cactttcttc ttaccacaca 
3200
cgtgtttgca gagtctttgc acgtgtcaaa cctggtacat gtcagttagt 
3250
aaaaatttag tttaatttag tagttgtagt ttcatgtgac tgtatgttca 
3300
taactatatg ataaacatga tagtggtaat ctaaaaaata tttgtatggt 
3350
ttggtaataa tggttttatt gaataaatga ataatgagta ctagttcgat 
3400
attgaatacg tgtgtgacac tcatttatta ttttgtctaa cttctagaaa 
3450
gagagactca aaaaaaggga atgcagcagt tactaagaaa gaaaaaggtg 
3500
agaaacgaaa catcagcttc gtgtaaatca aaactacagt tttctcgggc 
3550
caggtggctt tgacccaatt ttctcttcaa catttctata attccctttc 
3600
tatccctccc ttaacgactt atcaatcaac actaatcatc atcacttcac 
3650
tagattgtta tacagaagta tccatacaag tgtcacataa actgaatacc 
3700
cattatcaac aaaagtatca ctatcttttt tcttgaatta acagtttaac 
3750
actaaccaaa tagatagata gtataatgtt tttgatttta agaaaagaaa 
3800
cattacattt tccttcgtag aatttagaca ggtgatgtta aagaaaacaa 
3850
aaaaagagaa aactaataat tgtatatata tatgtatata aataaatatt 
3900
agaacatcag ccattttgtg aataaaccag ttataaaagt ctaaaaaagg 
3950
taaagagaaa aacatttcac caaaaaaaat cctctggtta atgttttctc 
4000
actttctctt tgttttcttt ctaacctctt tccacgaaaa gtcacgATGG 
4050
GAGATACCGC AGAGGATCAG GACGACCGAG CTATGATGGA AGCTGAAGGA 
4100
GTAACGAGCT TCTCCGAACT TCTTATGTTC TCTGACGGCG TTCTCAGCTC 
4150
CTCTTCCGAC CACCAACCTG AGGGTAATGT CGGCGATGGT GGAGAAGACA 
4200
GTTTAGGTTT TGTATTCTCC GGCAAAACTG GCTCAAGAAT GCTCTGTTTT 
4250
AGTGGAGGCT ATCAAAACGA CGACGAGTCA CTCTTCCTAG AACCTTCTGT 
4300
TCCAACCTCC GGAGTCTCTG ATCTTGACCC TTCATGCATT AAGATTGATT 
4350
GCAGGAACTC AAACGACGCG TGTACGGTCG ATAAATCTAC TAAATCATCA 
4400
ACCgtaagtc tctcattact gattctttat ttgcatagtt gcatgtaatt 
4450
aaggattaca aatttaaaga tgtgtttttt attgtgtgtg tcttgtgaag 
4500
AAGAAGAGAA CCGGAACGGG TAATGGGCAA GAGTCGGATC AAAATCGAAA 
4550
ACCGGGCAAG AAAGGGAAAC GAAATCAAGA GAAATCATCA GTTGGAATTG 
4600
CAAAGgtgtg acatttaata gtatgtatat acacatttct ttatgatcca 
4650
tattgttata gattaatatt ctcttgacca taatgttata gatttactgt 
4700
ttatcttttt tcgttttggt tgttaaaata ttaaaattag GTCAGGAAAG 
4750
AAAGGTTAGG GGAAAGAATT GCAGCGTTGC AGCAGTTGGT TTCTCCATAC 
4800
GGCAAGgtga tttttatatc taactcaaat tcttttataa tgatgcaatt 
4850
tatgattttg ttaagtcaag caagaaagac ctctaatcat aacataacac 
4900
caaagtaatg aaaaataatt tgttttgaat attaatatag tatttcatat 
4950
tgagtttttc caaaaggaag cttaagaagt cgcgatttgg ggtagtgtag 
5000
cataaattgg catccaatgt gaacttcaaa aagacatgaa agacaatgaa 
5050
acttgatcaa taaattaaag tatctttgtt tttctttatt ctagtctggt 
5100
ttatgtttaa ccatcatcat tgtacattag ttaaacaatg tgtacctttt 
5150
tagaggggta aaattaccaa acaaatatct ataaatgacc ctatttgcaa 
5200
tagtaaaata tctataaatg acactatttg caatagtaaa atttgacttt 
5250
tctgactgat acaaaaataa aattaaatga cagACAGATG CAGCTTCTGT 
5300
GTTGCATGAA GCGATGGGTT ACATCAAATT CTTACAAGAT CAGATTCAAG 
5350
TCCTTTGCTC TCCTTATCTA ATCAACCATT CTCTCgtaag tagaagtctc 
5400
tctctttctc tcttaattat tttttattaa tgaaatgata cttctgacat 
5450
gtcggcgacg tttattagGA CGGTGGAGTT GTCACCGGAG ATGTAATGGC 
5500
GGCGATGAAA GCGAAAGACT TGAGAAGCAG AGGATTATGT CTAGTACCTG 
5550
TCTCATCCAC CGTACACGTG GAAAATTCCA ACGGTGCTGA TTTCTGGTCA 
5600
CCTGCTACTA TGGGTCACAC TACGTCACCG TCGTTACCTC AAGGATTTTA 
5650
Attaaacggt cgtaggctga tatatattag tagtatttta gtagcctttt 
5700
ttcttgggtt ttgtttttgg ctgaagaact attactagta aatgttacac 
5750
ccagacattt ttttgggatt atctgggtgg tataaaaagg ttggaatctt 
5800
ttgtgtttgt aaaattagat tgtctaagtt ttcttaaagt ttctttgatg 
5850
tcactgtcac agttgcgacg agtagtgatg gtacttactg aaaggctaag 
5900
cttattcacg ctcttaaagt gttgtaatgc caccaagtca ccaacccaca 
5950
taactcactc actcacttga gctaaagacg tgcaaaacgt tttttctttg 
6000
ttttcccaca ttttcacaag cgcggtaaca aagaaagcaa gaatactata 
6050
atattattag accaaattat taacatttaa aaatagattg aatcttttgt 
6100
gtttgtaaat tttttctggt ccaatttttc tgaatgtttc tcagatgtca 
6150
gtcacgtcga gcagtggaac tgagaggcta agatttactc acacctaaat 
6200
attgtagtaa tgccaccaaa ccacatcact cactagtcac tatagtagac 
6250
gtgcacaaat tcttatttgt ttgtttctta tttcaacaag caataatcaa 
6300
tgaaaggttt attttgttac tagaccaaat tagtctaaat gattaagaat 
6350
agtttaatcc caatcatgtc ccaacttaaa aaaagaagac atgaaaatga 
6400
attaattaga atttttaagc ataatcagat tagttagaaa ttatagtata 
6450
gttgtttgtg ttagtgttat ggatgttttt tcatcaatca attagatatg 
6500
aaatgttatt atttatttat tttgaaaata gactgaaaat ttgaaatttt 
6550
tttaactagt taatgtgcta aaatattatg taacttttcc agtaaaatta 
6600
tattaagctt aaaagtagtt gtttttgttt taaagggatt agattgtaaa 
6650
atcccagaat ttaagatatt tgcaaactac acagacacac ttctactttg 
6700
accggtaatt tcattacatc gccggacggc cggagatttt atcgctctct 
6750
ctcttcctct ccatcttcac tacttaaatc tctccctccg tatctttctc 
6800
tggtgttcgc caATGGCGGT GTTTCCTATC GGTTCTCACT TTGCACCGCC 
6850
GCATCAGTTG ACGAAGAGAC ACGTCATCGC GACTTCATCA CCTATCTCCA 
6900
TCTCCACCCG ATTGCCGCAA AATGTTTCCT TTTCGAAAGT ATCTGGAGTT 
6950
ACAGGCTCGA CGAGGTTATC CAAACATGGT GTTCTCGTGA GGGCCGAGGA 
7000
TAAGATAAGG AGCTCTTCTT CTCCTTCTTC TCTCGATGAA CCAATCGATG 
7050
AGgttcgagt ttccacgatg ttgtcttagt acaaaattcg attttgatga 
7100
ttacccattt tcgcttttga tccaatctta gctaattact catgaacaag 
7150
tcacatattt tctaattgga taagtttcat tcatatagtg acctgaagaa 
7200
gaacactaaa atgggtgtag taatcgatgg tcattgctac agaaatgaaa 
7250
gtttatatct ttctgtgatc cacagGATTT GATGGACTCA TCAGGATTAT 
7300
GTGACCCGTT ATGCTCGGTT GATGAACCTA GTTCAAGTTA CTTTGAGGCG 
7350
AATTATCAGC CAAAGACAGA TATAATCAAA GCTCTTGCTA TTCTTGCAGC 
7400
AGCTCTTACA GGAACAGCTG CCA
7450