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| Locus | Common name | Short description |
| AT3G19510 | HAT3.1 | Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain (.1) |
>AT3G19510.1 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccII(FnuDII), AciI, AclI, AflII, AflIII, AhdI, AlwI, ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BssHII, BssSI, BstAPI, BstEII, BstUI, BstXI, BstZ17I, BtrI, ClaI, DrdI, EaeI, EagI, EarI, EciI, EcoNI, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PsiI, PspOMI, PstI, PvuII, RsrII, SacII, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, TliI, XbaI, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 1473 |
| AccI | GT|[AC][TG]AC | 470 |
| AccIII(BspMII) | T|CCGGA | 924 |
| AfeI | AGC|GCT | 1056 |
| AgeI | A|CCGGT | 329 |
| AluI | AG|CT | 282, 406, 654, 690, 971, 1435, 1479, 1841, 1934, 1947 |
| AlwNI | CAGNNN|CTG | 1388, 1882 |
| Aor51HI(Eco47III) | AGC|GCT | 1056 |
| ApoI | Pu|AATTPy | 262, 677, 1006, 1219, 1368 |
| AvaII | G|G[AT]CC | 331, 432, 1527, 1800 |
| BamHI | G|GATCC | 1458 |
| BanII | GPuGCPy|C | 407 |
| BfaI | C|TAG | 27, 783 |
| BglII | A|GATCT | 415, 705, 1395 |
| BlpI | GC|TNAGC | 1938 |
| BsaHI | GPu|CGPyC | 595, 1473 |
| BsaJI | C|CNNGG | 306, 335, 948, 1485 |
| BsaWI | [AT]|CCGG[AT] | 329, 566, 924 |
| BsiEI | CGPuPy|CG | 867 |
| BsiHKAI | G[AT]GC[AT]|C | 407 |
| BslI | CCNNNNN|NNGG | 306, 335, 1549, 1797 |
| Bsp1286I | G[GAT]GC[CAT]|C | 407 |
| BspEI | T|CCGGA | 924 |
| BspHI | T|CATGA | 177 |
| BsrFI | Pu|CCGGPy | 329, 1534 |
| BsrGI | T|GTACA | 1378, 1886 |
| BsrI | ACTGGN| | 1979, 2143 |
| BssKI | |CCNGG | 334, 629, 948, 1461, 1803 |
| BstBI | TT|CGAA | 351 |
| BstF5I | GGATGNN| | 928, 953, 1315 |
| BstNI | CC|[AT]GG | 334, 629, 1461, 1803 |
| BstYI | Pu|GATCPy | 40, 415, 705, 1395, 1458, 1866 |
| Bsu36I | CC|TNAGG | 1043 |
| BtgI | C|CPuPyGG | 306 |
| BtsI | GCAGTGNN| | 1168 |
| Cac8I | GCN|NGC | 689, 1434 |
| Cfr10I | [AG]|CCGG[TC] | 329, 1534 |
| DdeI | C|TNAG | 409, 418, 1042, 1186, 1309, 1477, 1735, 1781, 1876, 1937 |
| DpnI | GA-CH3|TC | 39, 188, 414, 704, 866, 1088, 1124, 1325, 1394, 1457, 1724, 1865, 2145 |
| DpnII | |GATC | 39, 188, 414, 704, 866, 1088, 1124, 1325, 1394, 1457, 1724, 1865, 2145 |
| DraI | TTT|AAA | 1255 |
| DraIII | CACNNN|GTG | 731 |
| EcoO109I | PuG|GNCCPy | 1801 |
| EcoRI | G|AATTC | 1219 |
| EcoRV | GAT|ATC | 793, 841 |
| Fnu4HI | GC|NGC | 683, 1047, 1053, 1840 |
| HaeII | PuGCGC|Py | 1056 |
| HaeIII | GG|CC | 642, 1288 |
| HhaI | GCG|C | 685, 1055 |
| HinP1I | G|CGC | 685, 1055 |
| HincII | GTPy|PuAC | 94, 470 |
| HindIII | A|AGCTT | 691 |
| HinfI | G|ANTC | 134, 243, 535, 753, 990, 1104, 1182, 1248, 1305, 1503, 1665, 1671, 1904, 2115 |
| HpaII | C|CGG | 328, 565, 923, 948, 1533 |
| Hpy188I | TCN|GA | 105, 123, 410, 1098, 1107, 1185, 1206, 1233, 1299, 1308, 1371, 1383, 1506, 1607, 1668, 1674, 1700, 1877, 2025 |
| HpyCH4III | ACN|GT | 90, 231, 886, 1021, 1084, 1692, 1706, 1883, 1959 |
| HpyCH4IV | A|CGT | 1472 |
| HpyCH4V | TG|CA | 151, 171, 391, 802, 959, 1228, 1492, 1645, 1717, 2122 |
| MboI | |GATC | 39, 188, 414, 704, 866, 1088, 1124, 1325, 1394, 1457, 1724, 1865, 2145 |
| MseI | T|TAA | 570, 693, 984, 1254, 1962, 1971, 1983, 2045 |
| MspI | C|CGG | 328, 565, 923, 948, 1533 |
| MwoI | GCNNNNN|NNGC | 689, 871, 1053 |
| N.BstNBI | GAGTCNNNN|N | 139, 758, 1253, 1508, 1676, 2120 |
| NciI | CC|[CG]GG | 948 |
| NlaIII | CATG| | 139, 176, 191, 1851 |
| NlaIV | GGN|NCC | 1458 |
| NspI | PuCATG|Py | 140, 1852 |
| PflFI | GACN|NNGTC | 1614 |
| PpuMI | PuG|G[AT]CCPy | 1801 |
| PshAI | GACNN|NNGTC | 1473 |
| PspGI | |CC[AT]GG | 334, 629, 1461, 1803 |
| PvuI | CGAT|CG | 867 |
| RsaI | GT|AC | 526, 1377, 1694, 1885 |
| SacI | GAGCT|C | 407 |
| SalI | G|TCGAC | 470 |
| Sau3AI | |GATC | 39, 188, 414, 704, 866, 1088, 1124, 1325, 1394, 1457, 1724, 1865, 2145 |
| Sau96I | G|GNCC | 331, 432, 1289, 1527, 1800 |
| ScrFI | CC|NGG | 334, 629, 948, 1461, 1803 |
| SfcI | C|TPuPyAG | 464 |
| SmlI | C|TPyPuAG | 1453 |
| SspI | AAT|ATT | 1035 |
| StyI | C|C[AT][AT]GG | 1485 |
| Taqƒ¿I | T|CGA | 350, 469, 550, 868, 1754, 2000, 2037 |
| TfiI | G|A[AT]TC | 243, 535, 990, 1104, 1182, 1305, 1665, 1904 |
| TseI | G|C[AT]GC | 1047, 1053, 1840 |
| Tsp45I | |GT[CG]AC | 136, 397 |
| Tsp509I | |AATT | 261, 312, 452, 589, 676, 697, 1005, 1218, 1367, 1495, 1828 |
| TspRI | NNCA[CG]TGNN| | 1168, 1390, 1693 |
| Tth111I | GACN|NNGTC | 1614 |
| XmnI | GAANN|NNTTC | 917 |
Click here to view TAIR data
>AT3G19510.1 length:2172
ATGTATAAAG CAGTAAGTAA GCGGGTAACT AGAAGTAGTG GATCTGGTTT | 50 |
GAAGCAGACA AATGTAGATA ATGGAGGAGA GATTAGTCCA ACTGTTGACA | 100 |
GAGTATCTGA ACAAGGCAAA TCATCAGAGG CAGGGAGTCA CATGCCAACT | 150 |
GATGCAAACG GAAATGGACA TTTGCATCAT GAGATTATGG ATCATGGAAA | 200 |
GGGGAATGAA GAACAGAAAC CAACCCCTCA AACCGTGAAG AAGGATTCTA | 250 |
ATACCAATAC CAAATTTTCA GGGTCTCATC GTGAGCTTGT CATCGGTCTT | 300 |
CCTTGCCGTG GACAATTTGA AATCCACAAC CGGTCCAGGG CATCTACGAG | 350 |
TTCGAAGAGG TTAGGAGGAG GTGGAGAAAG GAATGTGTTG TTTGCAAGTC | 400 |
ACAAGAGAGC TCAGAGATCT AAGGAAGATG CTGGACCATC TTCGGTTGTT | 450 |
GCTAATTCCA CACCTGTAGG TCGACCAAAG AAAAAGAATA AGACTATGAA | 500 |
CAAAGGACAA GTTAGAGAAG ATGATGAGTA CACAAGAATC AAAAAGAAAC | 550 |
TTCGATACTT TCTAAACCGG ATTAACTATG AGCAAAGCCT AATTGACGCC | 600 |
TATTCGTTAG AAGGCTGGAA AGGTTCAAGC CTGGAAAAGA TAAGGCCAGA | 650 |
GAAAGAGCTT GAACGAGCCA CAAAGGAAAT TTTGCGGCGC AAGCTTAAAA | 700 |
TTAGAGATCT TTTTCAGCAC CTTGACACAC TCTGTGCTGA AGGAAGCCTT | 750 |
CCAGAGTCTT TATTTGATAC TGATGGAGAG ATTTCTAGCG AGGATATCTT | 800 |
CTGTGCAAAA TGTGGTTCAA AGGACTTGTC TGTTGATAAT GATATCATAC | 850 |
TATGCGATGG GTTTTGCGAT CGAGGCTTTC ACCAATACTG TCTTGAACCA | 900 |
CCTCTGCGGA AAGAAGATAT TCCTCCGGAT GATGAGGGTT GGCTATGCCC | 950 |
CGGATGTGAT TGCAAAGATG ACAGCTTGGA CTTGCTTAAT GATTCTTTAG | 1000 |
GGACAAAATT TTCGGTCAGC GACAGTTGGG AGAAAATATT TCCTGAGGCA | 1050 |
GCAGCAGCGC TGGTTGGTGG AGGTCAAAAT CTTGACTGTG ATCTTCCTTC | 1100 |
AGATGATTCT GATGATGAAG AGTATGATCC AGATTGTTTG AATGATAATG | 1150 |
AAAATGATGA AGATGGCAGT GATGACAATG AAGAATCTGA GAACGAAGAT | 1200 |
GGTAGTTCTG ATGAAACTGA ATTCACATCT GCATCTGACG AAATGATTGA | 1250 |
GTCATTTAAA GAAGGGAAAG ATATAATGAA AGATGTAATG GCCCTTCCAT | 1300 |
CTGATGATTC TGAGGATGAT GACTATGATC CTGATGCCCC GACTTGTGAT | 1350 |
GATGATAAAG AAAGTTCAAA TTCTGATTGT ACATCAGACA CTGAAGATCT | 1400 |
TGAAACTTCC TTCAAAGGAG ATGAGACTAA TCAGCAAGCT GAAGATACAC | 1450 |
CACTTGAGGA TCCTGGCAGA CAGACGTCTC AGCTCCAAGG TGATGCAATT | 1500 |
TTAGAGTCAG ATGTTGGGCT TGATGATGGT CCTGCCGGTG TATCCAGAAG | 1550 |
GAGGAATGTT GAAAGGCTGG ATTACAAAAA GTTGTATGAT GAGGAATATG | 1600 |
ACAATGTTCC GACTTCGTCA AGTGATGATG ACGATTGGGA TAAAACTGCA | 1650 |
AGAATGGGAA AAGAAGATTC CGAGTCGGAA GATGAAGGGG ACACTGTACC | 1700 |
TCTGAAACAG TCTTCAAATG CAGAAGATCA TACTTCTAAG AAACTTATAC | 1750 |
GGAAGTCGAA AAGGGCAGAT AAAAAGGATA CCTTAGAAAT GCCACAAGAA | 1800 |
GGTCCTGGAG AAAATGGTGG TTCTGGTGAA ATTGAAAAAA GCAGCTCTTC | 1850 |
AGCATGTAAA CAGACAGATC CCAAAACTCA GAGACTGTAC ATATCTTTTC | 1900 |
AAGAGAATCA ATATCCAGAC AAAGCCACGA AGGAGAGCTT AGCCAAAGAG | 1950 |
CTACAAATGA CAGTTAAGCA AGTTAATAAC TGGTTTAAGC ATAGGCGTTG | 2000 |
GTCGATAAAC AGCAAACCTT TAGTTTCAGA GGAAAATGTC GAGAAGTTAA | 2050 |
AAACAGGCAA GGAAGGTGAA TGTGAGACAT CTGTTGCTGG AAGTAGCAAA | 2100 |
CAAACTATGG AAACCGAGTC AGTTGCAGAG AAACCAACCA ATACTGGATC | 2150 |
ACGGAAAAGA AGAAGAAAGT AG | 2200 |
>AT3G19510.1 longest ORF length:723
MYKAVSKRVT RSSGSGLKQT NVDNGGEISP TVDRVSEQGK SSEAGSHMPT | 50 |
DANGNGHLHH EIMDHGKGNE EQKPTPQTVK KDSNTNTKFS GSHRELVIGL | 100 |
PCRGQFEIHN RSRASTSSKR LGGGGERNVL FASHKRAQRS KEDAGPSSVV | 150 |
ANSTPVGRPK KKNKTMNKGQ VREDDEYTRI KKKLRYFLNR INYEQSLIDA | 200 |
YSLEGWKGSS LEKIRPEKEL ERATKEILRR KLKIRDLFQH LDTLCAEGSL | 250 |
PESLFDTDGE ISSEDIFCAK CGSKDLSVDN DIILCDGFCD RGFHQYCLEP | 300 |
PLRKEDIPPD DEGWLCPGCD CKDDSLDLLN DSLGTKFSVS DSWEKIFPEA | 350 |
AAALVGGGQN LDCDLPSDDS DDEEYDPDCL NDNENDEDGS DDNEESENED | 400 |
GSSDETEFTS ASDEMIESFK EGKDIMKDVM ALPSDDSEDD DYDPDAPTCD | 450 |
DDKESSNSDC TSDTEDLETS FKGDETNQQA EDTPLEDPGR QTSQLQGDAI | 500 |
LESDVGLDDG PAGVSRRRNV ERLDYKKLYD EEYDNVPTSS SDDDDWDKTA | 550 |
RMGKEDSESE DEGDTVPLKQ SSNAEDHTSK KLIRKSKRAD KKDTLEMPQE | 600 |
GPGENGGSGE IEKSSSSACK QTDPKTQRLY ISFQENQYPD KATKESLAKE | 650 |
LQMTVKQVNN WFKHRRWSIN SKPLVSEENV EKLKTGKEGE CETSVAGSSK | 700 |
QTMETESVAE KPTNTGSRKR RRK | 750 |