fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G19860 bHLH121 basic Helix-Loop-Helix 121, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT3G19860.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 610
NcoI C|CATGG 328
SacI GAGCT|C 160
SmaI CCC|GGG 409
StyI C|C[AT][AT]GG 328


Click here to view TAIR data

>AT3G19860.1 length:855
ATGGACGTTT CTGCTAGAAA GTCACAAAAA GCTGGGCGCG AAAAGTTGAG 
50
GAGGGAAAAA CTGAATGAGC ATTTTGTTGA ACTGGGAAAT GTACTCGATC 
100
CAGAGAGACC CAAGAATGAC AAAGCCACGA TTCTGACTGA TACTGTTCAG 
150
TTGTTGAAAG AGCTCACATC TGAAGTCAAC AAACTGAAAT CTGAGTACAC 
200
CGCATTGACA GATGAGTCCC GCGAGTTGAC ACAGGAGAAA AACGACCTGA 
250
GAGAAGAAAA GACATCGCTG AAATCAGATA TAGAGAATCT CAATCTTCAA 
300
TACCAGCAGA GATTAAGGTC AATGTCTCCA TGGGGAGCTG CGATGGATCA 
350
CACAGTCATG ATGGCTCCAC CACCCTCCTT TCCATACCCT ATGCCTATTG 
400
CTATGCCTCC CGGGTCAATC CCAATGCATC CATCAATGCC ATCTTACACA 
450
TACTTTGGGA ACCAGAACCC TAGCATGATC CCAGCTCCAT GTCCTACATA 
500
CATGCCCTAC ATGCCTCCTA ATACAGTCGT TGAGCAACAA TCCGTGCACA 
550
TTCCACAGAA CCCCGGTAAC CGTTCTCGGG AACCTAGAGC AAAGGTTTCA 
600
AGAGAGAGCA GATCTGAGAA AGCAGAGGAC TCCAACGAAG TTGCAACACA 
650
ACTCGAATTA AAAACCCCTG GATCTACTTC TGATAAGGAT ACATTGCAAA 
700
GGCCAGAGAA GACAAAGAGA TGTAAGAGAA ACAACAACAA CAACTCAATA 
750
GAAGAAAGCT CTCATTCTAG CAAGTGTTCA TCTTCTCCGA GCGTACGAGA 
800
CCACAGTTCT TCCAGTAGCG TAGCTGGTGG CCAAAAACCT GATGATGCAA 
850
AATGA
900

>AT3G19860.1 longest ORF length:284
MDVSARKSQK AGREKLRREK LNEHFVELGN VLDPERPKND KATILTDTVQ 
50
LLKELTSEVN KLKSEYTALT DESRELTQEK NDLREEKTSL KSDIENLNLQ 
100
YQQRLRSMSP WGAAMDHTVM MAPPPSFPYP MPIAMPPGSI PMHPSMPSYT 
150
YFGNQNPSMI PAPCPTYMPY MPPNTVVEQQ SVHIPQNPGN RSREPRAKVS 
200
RESRSEKAED SNEVATQLEL KTPGSTSDKD TLQRPEKTKR CKRNNNNNSI 
250
EESSHSSKCS SSPSVRDHSS SSSVAGGQKP DDAK
300