Locus |
Common name |
Short description |
AT3G19860 |
bHLH121 |
basic Helix-Loop-Helix 121, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT3G19860.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
610 |
NcoI
| C|CATGG |
328 |
SacI
| GAGCT|C |
160 |
SmaI
| CCC|GGG |
409 |
StyI
| C|C[AT][AT]GG |
328 |
Click here to view TAIR data
>AT3G19860.1 length:855
ATGGACGTTT CTGCTAGAAA GTCACAAAAA GCTGGGCGCG AAAAGTTGAG | 50 |
GAGGGAAAAA CTGAATGAGC ATTTTGTTGA ACTGGGAAAT GTACTCGATC | 100 |
CAGAGAGACC CAAGAATGAC AAAGCCACGA TTCTGACTGA TACTGTTCAG | 150 |
TTGTTGAAAG AGCTCACATC TGAAGTCAAC AAACTGAAAT CTGAGTACAC | 200 |
CGCATTGACA GATGAGTCCC GCGAGTTGAC ACAGGAGAAA AACGACCTGA | 250 |
GAGAAGAAAA GACATCGCTG AAATCAGATA TAGAGAATCT CAATCTTCAA | 300 |
TACCAGCAGA GATTAAGGTC AATGTCTCCA TGGGGAGCTG CGATGGATCA | 350 |
CACAGTCATG ATGGCTCCAC CACCCTCCTT TCCATACCCT ATGCCTATTG | 400 |
CTATGCCTCC CGGGTCAATC CCAATGCATC CATCAATGCC ATCTTACACA | 450 |
TACTTTGGGA ACCAGAACCC TAGCATGATC CCAGCTCCAT GTCCTACATA | 500 |
CATGCCCTAC ATGCCTCCTA ATACAGTCGT TGAGCAACAA TCCGTGCACA | 550 |
TTCCACAGAA CCCCGGTAAC CGTTCTCGGG AACCTAGAGC AAAGGTTTCA | 600 |
AGAGAGAGCA GATCTGAGAA AGCAGAGGAC TCCAACGAAG TTGCAACACA | 650 |
ACTCGAATTA AAAACCCCTG GATCTACTTC TGATAAGGAT ACATTGCAAA | 700 |
GGCCAGAGAA GACAAAGAGA TGTAAGAGAA ACAACAACAA CAACTCAATA | 750 |
GAAGAAAGCT CTCATTCTAG CAAGTGTTCA TCTTCTCCGA GCGTACGAGA | 800 |
CCACAGTTCT TCCAGTAGCG TAGCTGGTGG CCAAAAACCT GATGATGCAA | 850 |
AATGA | 900 |
>AT3G19860.1 longest ORF length:284
MDVSARKSQK AGREKLRREK LNEHFVELGN VLDPERPKND KATILTDTVQ | 50 |
LLKELTSEVN KLKSEYTALT DESRELTQEK NDLREEKTSL KSDIENLNLQ | 100 |
YQQRLRSMSP WGAAMDHTVM MAPPPSFPYP MPIAMPPGSI PMHPSMPSYT | 150 |
YFGNQNPSMI PAPCPTYMPY MPPNTVVEQQ SVHIPQNPGN RSREPRAKVS | 200 |
RESRSEKAED SNEVATQLEL KTPGSTSDKD TLQRPEKTKR CKRNNNNNSI | 250 |
EESSHSSKCS SSPSVRDHSS SSSVAGGQKP DDAK | 300 |
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