fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G19860 bHLH121 basic Helix-Loop-Helix 121, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT3G19860.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 769
NcoI C|CATGG 487
SacI GAGCT|C 319
SmaI CCC|GGG 568
StyI C|C[AT][AT]GG 487


Click here to view TAIR data

>AT3G19860.2 length:1014
ATGGGGATAA GAGAAAATGG AATAATGCTT GTGAGCAGAG AGAGAGAGCG 
50
AGCGAGGAGG CTAGAGAATC GAGAATCGAT CTTCGCCGAA CCACCTTGTC 
100
TTCTCTTAGC TCATCGAATC TCTCCGTCGC CGTCGATTCT TCCCGCCGAA 
150
GAGGAGGTCA TGGACGTTTC TGCTAGAAAG TCACAAAAAG CTGGGCGCGA 
200
AAAGTTGAGG AGGGAAAAAC TGAATGAGCA TTTTGTTGAA CTGGGAAATG 
250
TACTCGATCC AGAGAGACCC AAGAATGACA AAGCCACGAT TCTGACTGAT 
300
ACTGTTCAGT TGTTGAAAGA GCTCACATCT GAAGTCAACA AACTGAAATC 
350
TGAGTACACC GCATTGACAG ATGAGTCCCG CGAGTTGACA CAGGAGAAAA 
400
ACGACCTGAG AGAAGAAAAG ACATCGCTGA AATCAGATAT AGAGAATCTC 
450
AATCTTCAAT ACCAGCAGAG ATTAAGGTCA ATGTCTCCAT GGGGAGCTGC 
500
GATGGATCAC ACAGTCATGA TGGCTCCACC ACCCTCCTTT CCATACCCTA 
550
TGCCTATTGC TATGCCTCCC GGGTCAATCC CAATGCATCC ATCAATGCCA 
600
TCTTACACAT ACTTTGGGAA CCAGAACCCT AGCATGATCC CAGCTCCATG 
650
TCCTACATAC ATGCCCTACA TGCCTCCTAA TACAGTCGTT GAGCAACAAT 
700
CCGTGCACAT TCCACAGAAC CCCGGTAACC GTTCTCGGGA ACCTAGAGCA 
750
AAGGTTTCAA GAGAGAGCAG ATCTGAGAAA GCAGAGGACT CCAACGAAGT 
800
TGCAACACAA CTCGAATTAA AAACCCCTGG ATCTACTTCT GATAAGGATA 
850
CATTGCAAAG GCCAGAGAAG ACAAAGAGAT GTAAGAGAAA CAACAACAAC 
900
AACTCAATAG AAGAAAGCTC TCATTCTAGC AAGTGTTCAT CTTCTCCGAG 
950
CGTACGAGAC CACAGTTCTT CCAGTAGCGT AGCTGGTGGC CAAAAACCTG 
1000
ATGATGCAAA ATGA
1050

>AT3G19860.2 longest ORF length:337
MGIRENGIML VSRERERARR LENRESIFAE PPCLLLAHRI SPSPSILPAE 
50
EEVMDVSARK SQKAGREKLR REKLNEHFVE LGNVLDPERP KNDKATILTD 
100
TVQLLKELTS EVNKLKSEYT ALTDESRELT QEKNDLREEK TSLKSDIENL 
150
NLQYQQRLRS MSPWGAAMDH TVMMAPPPSF PYPMPIAMPP GSIPMHPSMP 
200
SYTYFGNQNP SMIPAPCPTY MPYMPPNTVV EQQSVHIPQN PGNRSREPRA 
250
KVSRESRSEK AEDSNEVATQ LELKTPGSTS DKDTLQRPEK TKRCKRNNNN 
300
NSIEESSHSS KCSSSPSVRD HSSSSSVAGG QKPDDAK
350