| Locus |
Common name |
Short description |
| AT3G20310 |
ATERF7, ATERF-7 |
ethylene response factor 7 (.1) |
>AT3G20310.1 CDS map
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Uncut enzymes: AatII, Acc65I, AccI, AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, DraI, DraIII, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, N.BstNBI, , NarI, NciI, NcoI, NdeI, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccII(FnuDII)
| CG|CG |
188, 475 |
| AccIII(BspMII)
| T|CCGGA |
549 |
| AciI
| C|CGC |
33, 48, 171, 201, 474, 625, 662 |
| AgeI
| A|CCGGT |
540 |
| AluI
| AG|CT |
115, 544 |
| AvaII
| G|G[AT]CC |
30, 222, 350, 456 |
| BglI
| GCCNNNN|NGGC |
480 |
| BsaAI
| PyAC|GTPu |
209 |
| BsaHI
| GPu|CGPyC |
483 |
| BsaJI
| C|CNNGG |
73, 100, 219, 476 |
| BsaWI
| [AT]|CCGG[AT] |
318, 540, 549 |
| BsiEI
| CGPuPy|CG |
248, 412 |
| BslI
| CCNNNNN|NNGG |
668 |
| BspDI
| AT|CGAT |
250, 337 |
| BspEI
| T|CCGGA |
549 |
| BsrFI
| Pu|CCGGPy |
52, 414, 540 |
| BssKI
| |CCNGG |
380 |
| BssSI
| C|TCGTG |
146 |
| BstF5I
| GGATGNN| |
673 |
| BstNI
| CC|[AT]GG |
380 |
| BstUI
| CG|CG |
188, 475 |
| BstYI
| Pu|GATCPy |
58, 122 |
| BtgI
| C|CPuPyGG |
219, 476 |
| Cac8I
| GCN|NGC |
187, 414, 691 |
| Cfr10I
| [AG]|CCGG[TC] |
52, 414, 540 |
| ClaI
| AT|CGAT |
250, 337 |
| DdeI
| C|TNAG |
118 |
| DpnI
| GA-CH3|TC |
57, 121, 128, 247, 334, 338, 650, 704, 719 |
| DpnII
| |GATC |
57, 121, 128, 247, 334, 338, 650, 704, 719 |
| DrdI
| GACNNNN|NNGTC |
104 |
| EaeI
| Py|GGCCPu |
412 |
| EagI
| C|GGCCG |
412 |
| EcoRV
| GAT|ATC |
524, 607 |
| Fnu4HI
| GC|NGC |
114, 183, 204, 386, 392, 424, 433, 474, 480 |
| HaeIII
| GG|CC |
229, 411 |
| HhaI
| GCG|C |
189 |
| HinP1I
| G|CGC |
189 |
| HincII
| GTPy|PuAC |
679 |
| HinfI
| G|ANTC |
109, 168, 323, 573 |
| HpaII
| C|CGG |
51, 317, 413, 539, 548, 628 |
| Hpy188I
| TCN|GA |
326, 527, 730 |
| Hpy99I
| CG[AT]CG| |
23, 490, 580, 596 |
| HpyCH4III
| ACN|GT |
438, 503, 712 |
| HpyCH4IV
| A|CGT |
208, 724 |
| HpyCH4V
| TG|CA |
184 |
| MboI
| |GATC |
57, 121, 128, 247, 334, 338, 650, 704, 719 |
| MseI
| T|TAA |
134, 441, 516, 654 |
| MspA1I
| C[AC]G|C[GT]G |
116, 476 |
| MspI
| C|CGG |
51, 317, 413, 539, 548, 628 |
| MwoI
| GCNNNNN|NNGC |
180, 392, 430, 480 |
| NaeI
| GCC|GGC |
414 |
| NgoMIV
| G|CCGGC |
414 |
| NlaIII
| CATG| |
427, 509 |
| NlaIV
| GGN|NCC |
31, 69 |
| NspI
| PuCATG|Py |
510 |
| PspGI
| |CC[AT]GG |
380 |
| PvuI
| CGAT|CG |
248 |
| PvuII
| CAG|CTG |
116 |
| RsaI
| GT|AC |
159, 714 |
| RsrII
| CG|G[AT]CCG |
457 |
| SacII
| CCGC|GG |
476 |
| Sau3AI
| |GATC |
57, 121, 128, 247, 334, 338, 650, 704, 719 |
| Sau96I
| G|GNCC |
30, 222, 350, 456 |
| ScrFI
| CC|NGG |
380 |
| SgrAI
| CPu|CCGGPyG |
53 |
| StyI
| C|C[AT][AT]GG |
100 |
| Taqƒ¿I
| T|CGA |
106, 165, 249, 336 |
| TfiI
| G|A[AT]TC |
109, 168, 323, 573 |
| TseI
| G|C[AT]GC |
114, 183, 386, 392, 424, 433 |
| Tsp509I
| |AATT |
239, 374, 656 |
| TspRI
| NNCA[CG]TGNN| |
713 |
Click here to view TAIR data
>AT3G20310.1 length:735
ATGAGGAAAG GGAGAGGCTC TTCCGTCGTT GGACCCGCCC TTCCAGTAAC | 50 |
CGCCGGTGGA TCTGTGAAGG AGCCGAGGTA TAGAGGCGTT AGGAAGAGAC | 100 |
CTTGGGGTCG ATTCGCAGCT GAGATCCGTG ATCCATTAAA AAAATCTCGT | 150 |
GTCTGGCTCG GTACTTTCGA TTCCGCCGTA GATGCTGCAC GCGCTTACGA | 200 |
TACCGCCGCA CGTAACCTCC GTGGTCCAAA GGCCAAGACC AATTTCCCGA | 250 |
TCGATTGTTC TCCTTCTTCT CCTCTCCAAC CTCTCACCTA CCTCCACAAT | 300 |
CAAAACCTCT GTTCTCCTCC GGTGATTCAG AACCAGATCG ATCCGTTTAT | 350 |
GGACCATCGG TTATACGGCG GAGGTAATTT CCAGGAGCAG CAGCAGCAGC | 400 |
AGATTATTAG TCGGCCGGCG AGTAGCAGCA TGAGCAGCAC CGTTAAATCT | 450 |
TGTAGCGGAC CGAGACCGAT GGAAGCCGCG GCGGCGTCTT CGTCGGTGGC | 500 |
GAAACCGTTA CATGCGATTA AGAGATATCC GAGAACTCCA CCGGTAGCTC | 550 |
CGGAGGATTG TCATAGCGAC TGCGATTCTT CGTCGTCTGT TATTGACGAC | 600 |
GGAGATGATA TCGCATCTTC GTCTTCCCGC CGGAAAACGC CGTTTCAGTT | 650 |
TGATCTTAAT TTCCCGCCGT TGGATGGCGT TGACTTATTC GCTGGCGGGA | 700 |
TAGATGATCT CCACTGTACC GATCTACGTC TCTGA | 750 |
>AT3G20310.1 longest ORF length:244
MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR | 50 |
VWLGTFDSAV DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN | 100 |
QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS | 150 |
CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD | 200 |
GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL | 250 |
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