fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G20640 bHLH123 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G20640.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 739, 1254
HindIII A|AGCTT 130, 255, 377
PvuII CAG|CTG 343


Click here to view TAIR data

>AT3G20640.1 length:1365
ATGGGAGATC ATCATGATTT CATCAACTCA GGAAGCTGGT GGAAAGTATC 
50
TTCTTCTTCT TCACCATCTT CTTCTTCTTC CATGAGAGCA AGCTCTATTG 
100
AATCTGGTGG TTCTGCTGTT TTCCATGATA AGCTTCATCA TCATTCTTTA 
150
GCTACTGATC ACCATCTTCA GATGATTGGT TTAGGACTTT CTTCACAATC 
200
ACCTGTTGAT CAATGGAACC AATCTCTCTT ACGAGGAGAT AGTAAAGCGG 
250
AGACAAGCTT TGGTGTGATG CTTCAAGAGA ATCTCAATTT AGATGCCACT 
300
TCAAACGCAA ACGCTAACAC AACGTCATCC ACATCTTCTT ACCAGCTGCA 
350
AGAATCTGAT TCCTCTCACC ATCATCAAGC TTTGTGGCGA GATCCACAAA 
400
GCGATTTCAA ACCGCAGATT TTAACGAGTG GTGGTAATCG CGGGTTTTTC 
450
TTAGATCATC AGTTCAGTCC TCATGGTAGC TCAAGTACCG ACAGTAGCAC 
500
AGTAACATGT CAAGGTTTCG CTGTTGACAA CTCGTCAAAC GCCATGTACG 
550
CAGCAACAAC AACAACTCCT AATTCATCTT CCGGTATGTT TCATCATCAG 
600
CAAGCAGGTG GTTTTGGCTC TTCTGATCAA CAACCGTCGA GGAATCATCA 
650
ACAGTCATCT CTTGGCTATT CTCAGTTTGG ATCATCCACC GGAAACTATG 
700
ATCAAATGGC GTCAGCGTTA CCATCGACTT GGTTTTTAAG ATCTTCTCCG 
750
CCGCCAAAAC CACACAGTCC TTTGAGATTC TCTAATAACG CAACGTTTTG 
800
GAACCCCGCG GCTGCGGGAA ACGCCGGTGC TCCTCCTCCT CATGACGCGT 
850
CTTCTAACTT TTTCCCGGCG TTACAACCGC CGCAGATTCA TCCGCAGAGT 
900
TTTGACGAAC AACCAAAGAA TATATCGGAG ATTAGAGATT CAAGTAGCAA 
950
CGAAGTAAAG AGAGGAGGAA ACGATCATCA GCCGGCGGCG AAAAGAGCTA 
1000
AGAGCGAAGC AGCGTCTCCG TCACCAGCTT TCAAGAGGAA AGAGAAAATG 
1050
GGGGACAGAA TCGCTGCGCT CCAACAATTG GTTTCACCTT TCGGAAAGAC 
1100
TGATGCAGCC TCAGTGCTCT CTGAAGCCAT TGAATACATT AAGTTCTTAC 
1150
ACCAACAAGT TTCTGCTCTG AGCAACCCAT ACATGAAAAG TGGAGCTTCT 
1200
TTACAACATC AACAGAGTGA TCATTCCACA GAGCTAGAAG TATCAGAAGA 
1250
ACCAGATCTT AGAAGTCGAG GTTTATGCTT AGTGCCAGTT TCAAGCACAT 
1300
TTCCAGTGAC ACACGATACT ACAGTAGATT TCTGGACTCC TACATTTGGT 
1350
GGGACTTTTA GATAG
1400

>AT3G20640.1 longest ORF length:454
MGDHHDFINS GSWWKVSSSS SPSSSSSMRA SSIESGGSAV FHDKLHHHSL 
50
ATDHHLQMIG LGLSSQSPVD QWNQSLLRGD SKAETSFGVM LQENLNLDAT 
100
SNANANTTSS TSSYQLQESD SSHHHQALWR DPQSDFKPQI LTSGGNRGFF 
150
LDHQFSPHGS SSTDSSTVTC QGFAVDNSSN AMYAATTTTP NSSSGMFHHQ 
200
QAGGFGSSDQ QPSRNHQQSS LGYSQFGSST GNYDQMASAL PSTWFLRSSP 
250
PPKPHSPLRF SNNATFWNPA AAGNAGAPPP HDASSNFFPA LQPPQIHPQS 
300
FDEQPKNISE IRDSSSNEVK RGGNDHQPAA KRAKSEAASP SPAFKRKEKM 
350
GDRIAALQQL VSPFGKTDAA SVLSEAIEYI KFLHQQVSAL SNPYMKSGAS 
400
LQHQQSDHST ELEVSEEPDL RSRGLCLVPV SSTFPVTHDT TVDFWTPTFG 
450
GTFR
500