fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G20770 AtEIN3, EIN3 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1)

>AT3G20770.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AciI, AfeI, AflII, AflIII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, EaeI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, HaeII, HgaI, HincII, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XcmI, XhoI, XmnI
Name Recognition sequence Cut positions
AccIII(BspMII) T|CCGGA 360
AclI AA|CGTT 1641
AhdI GACNNN|NNGTC 1788
AluI AG|CT 88, 256, 280, 331, 537, 801, 900, 1023, 1437, 1711, 1755
ApoI Pu|AATTPy 1047, 1123, 1242
AvaI C|PyCGPuG 483, 910
AvaII G|G[AT]CC 441, 513, 696
BanII GPuGCPy|C 281, 1024, 1438
BbvCI CC|TCAGC 1355
BfaI C|TAG 258, 276, 894
BglII A|GATCT 1152
BlpI GC|TNAGC 92
BsaHI GPu|CGPyC 1788
BsaJI C|CNNGG 483, 637, 890, 1224, 1360, 1557
BsaWI [AT]|CCGG[AT] 360
BsiHKAI G[AT]GC[AT]|C 281, 1024, 1438
BslI CCNNNNN|NNGG 366, 381, 675, 1262, 1344, 1416
BsmI GAATGCN| 1848
BsoBI C|PyCGPuG 483, 910
Bsp1286I G[GAT]GC[CAT]|C 281, 1024, 1438
BspEI T|CCGGA 360
BspHI T|CATGA 492, 720, 1127
BsrI ACTGGN| 382, 1263
BssKI |CCNGG 482, 859, 1223, 1312, 1557, 1821
BssSI C|TCGTG 805
BstF5I GGATGNN| 162, 1065, 1843
BstNI CC|[AT]GG 859, 1312, 1557, 1821
BstYI Pu|GATCPy 293, 794, 1152
BtgI C|CPuPyGG 637
Cac8I GCN|NGC 255, 864, 950
DdeI C|TNAG 91, 598, 790, 1354, 1373, 1433
DpnI GA-CH3|TC 51, 292, 431, 558, 590, 689, 793, 1151, 1429, 1694
DpnII |GATC 51, 292, 431, 558, 590, 689, 793, 1151, 1429, 1694
DraIII CACNNN|GTG 59
DrdI GACNNNN|NNGTC 1090, 1462
EcoO109I PuG|GNCCPy 697
EcoRI G|AATTC 1047, 1123, 1242
Fnu4HI GC|NGC 179, 228, 447, 1302, 1627, 1713, 1741, 1850, 1859
FspI TGC|GCA 1206
HaeIII GG|CC 642, 666, 1362
HhaI GCG|C 1205
HinP1I G|CGC 1205
HinfI G|ANTC 99, 488, 518, 551, 885, 912, 1002, 1193, 1767
HpaII C|CGG 359, 482, 1222
Hpy188I TCN|GA 390, 599, 956, 1119, 1154, 1434
HpyCH4III ACN|GT 586, 1176, 1282, 1292, 1524, 1735, 1775
HpyCH4IV A|CGT 187, 604, 1640
HpyCH4V TG|CA 531, 579, 700, 825, 968, 1077, 1690, 1714, 1848
MboI |GATC 51, 292, 431, 558, 590, 689, 793, 1151, 1429, 1694
MfeI C|AATTG 1388
MseI T|TAA 6, 183, 398, 873, 1332, 1394, 1677
MslI CAPyNN|NNPuTG 1165, 1325, 1447
MspI C|CGG 359, 482, 1222
MwoI GCNNNNN|NNGC 809, 1219, 1856
N.BstNBI GAGTCNNNN|N 890, 917, 1007
NciI CC|[CG]GG 482, 1223
NdeI CA|TATG 772, 1875
NlaIII CATG| 31, 491, 719, 915, 1079, 1126, 1266, 1319, 1441, 1447, 1489, 1564, 1783
NlaIV GGN|NCC 1751
NsiI ATGCA|T 1078
NspI PuCATG|Py 1267
PflMI CCANNNN|NTGG 1262
PpuMI PuG|G[AT]CCPy 697
PspGI |CC[AT]GG 859, 1312, 1557, 1821
PstI CTGCA|G 1691
RsaI GT|AC 1450
SacI GAGCT|C 281, 1024, 1438
Sau3AI |GATC 51, 292, 431, 558, 590, 689, 793, 1151, 1429, 1694
Sau96I G|GNCC 441, 513, 696
ScrFI CC|NGG 482, 859, 1223, 1312, 1557, 1821
SfcI C|TPuPyAG 1340, 1691
SmaI CCC|GGG 483
SmlI C|TPyPuAG 193, 248, 284, 335, 1027
StyI C|C[AT][AT]GG 890, 1360
Taqƒ¿I T|CGA 993, 1244, 1276, 1683, 1779, 1794, 1814
TfiI G|A[AT]TC 99, 488, 1193, 1767
TseI G|C[AT]GC 228, 1302, 1627, 1713, 1850, 1859
Tsp45I |GT[CG]AC 378, 1508
Tsp509I |AATT 147, 395, 1046, 1122, 1241, 1387
TspRI NNCA[CG]TGNN| 587, 1368, 1512, 1690
XbaI T|CTAGA 277
XmaI C|CCGGG 483


Click here to view TAIR data

>AT3G20770.1 length:1887
ATGATGTTTA ATGAGATGGG AATGTGTGGA AACATGGATT TCTTCTCTTC 
50
TGGATCACTT GGTGAAGTTG ATTTCTGTCC TGTTCCACAA GCTGAGCCTG 
100
ATTCCATTGT TGAAGATGAC TATACTGATG ATGAGATTGA TGTTGATGAA 
150
TTGGAGAGGA GGATGTGGAG AGACAAAATG CGGCTTAAAC GTCTCAAGGA 
200
GCAGGATAAG GGTAAAGAAG GTGTTGATGC TGCTAAACAG AGGCAGTCTC 
250
AAGAGCAAGC TAGGAGGAAG AAAATGTCTA GAGCTCAAGA TGGGATCTTG 
300
AAGTATATGT TGAAGATGAT GGAAGTTTGT AAAGCTCAAG GCTTTGTTTA 
350
TGGGATTATT CCGGAGAATG GGAAGCCTGT GACTGGTGCT TCTGATAATT 
400
TAAGGGAGTG GTGGAAAGAT AAGGTTAGGT TTGATCGTAA TGGTCCTGCG 
450
GCTATTACCA AGTATCAAGC GGAGAATAAT ATCCCGGGGA TTCATGAAGG 
500
TAATAACCCG ATTGGACCGA CTCCTCATAC CTTGCAAGAG CTTCAAGACA 
550
CGACTCTTGG ATCGCTTTTG TCTGCGTTGA TGCAACACTG TGATCCTCCT 
600
CAGAGACGTT TTCCTTTGGA GAAAGGAGTT CCTCCTCCGT GGTGGCCTAA 
650
TGGGAAAGAG GATTGGTGGC CTCAACTTGG TTTGCCTAAA GATCAAGGTC 
700
CTGCACCTTA CAAGAAGCCT CATGATTTGA AGAAGGCGTG GAAAGTCGGC 
750
GTTTTGACTG CGGTTATCAA GCATATGTTT CCTGATATTG CTAAGATCCG 
800
TAAGCTCGTG AGGCAATCTA AATGTTTGCA GGATAAGATG ACTGCTAAAG 
850
AGAGTGCTAC CTGGCTTGCT ATTATTAACC AAGAAGAGTC CTTGGCTAGA 
900
GAGCTTTATC CCGAGTCATG TCCACCTCTT TCTCTGTCTG GTGGAAGTTG 
950
CTCGCTTCTG ATGAATGATT GCAGTCAATA CGATGTTGAA GGTTTCGAGA 
1000
AGGAGTCTCA CTATGAAGTG GAAGAGCTCA AGCCAGAAAA AGTTATGAAT 
1050
TCTTCAAACT TTGGGATGGT TGCTAAAATG CATGACTTTC CTGTCAAAGA 
1100
AGAAGTCCCA GCAGGAAACT CGGAATTCAT GAGAAAGAGA AAGCCAAACA 
1150
GAGATCTGAA CACTATTATG GACAGAACCG TTTTCACCTG CGAGAATCTT 
1200
GGGTGTGCGC ACAGCGAAAT CAGCCGGGGA TTTCTGGATA GGAATTCGAG 
1250
AGACAACCAT CAACTGGCAT GTCCACATCG AGACAGTCGC TTACCGTATG 
1300
GAGCAGCACC ATCCAGGTTT CATGTCAATG AAGTTAAGCC TGTAGTTGGA 
1350
TTTCCTCAGC CAAGGCCAGT GAACTCAGTA GCCCAACCAA TTGACTTAAC 
1400
GGGTATAGTT CCTGAAGATG GACAGAAGAT GATCTCAGAG CTCATGTCCA 
1450
TGTACGACAG AAATGTCCAG AGCAACCAAA CCTCTATGGT CATGGAAAAT 
1500
CAAAGCGTGT CACTGCTTCA ACCCACAGTC CATAACCATC AAGAACATCT 
1550
CCAGTTCCCA GGAAACATGG TGGAAGGAAG TTTCTTTGAA GACTTGAACA 
1600
TCCCAAACAG AGCAAACAAC AACAACAGCA GCAACAATCA AACGTTTTTT 
1650
CAAGGGAACA ACAACAACAA CAATGTGTTT AAGTTCGACA CTGCAGATCA 
1700
CAACAACTTT GAAGCTGCAC ATAACAACAA CAATAACAGT AGCGGCAACA 
1750
GGTTCCAGCT TGTGTTTGAT TCCACACCGT TCGACATGGC GTCATTCGAT 
1800
TACAGAGATG ATATGTCGAT GCCAGGAGTA GTAGGAACGA TGGATGGAAT 
1850
GCAGCAGAAG CAGCAAGATG TATCCATATG GTTCTAA
1900

>AT3G20770.1 longest ORF length:628
MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE 
50
LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL 
100
KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA 
150
AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP 
200
QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG 
250
VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR 
300
ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN 
350
SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL 
400
GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG 
450
FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN 
500
QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF 
550
QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD 
600
YRDDMSMPGV VGTMDGMQQK QQDVSIWF
650