Locus |
Common name |
Short description |
AT3G20910 |
NF-YA9 |
"nuclear factor Y, subunit A9", nuclear factor Y, subunit A9 (.1) |
>AT3G20910.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
384 |
HindIII
| A|AGCTT |
683, 764 |
HpaI
| GTT|AAC |
229 |
NdeI
| CA|TATG |
443 |
PvuII
| CAG|CTG |
266 |
SacI
| GAGCT|C |
810 |
StyI
| C|C[AT][AT]GG |
100, 557, 640 |
Click here to view TAIR data
>AT3G20910.1 length:912
ATGGGAATTG AAGACATGCA TTCAAAATCT GACAGTGGTG GGAACAAGGT | 50 |
TGATTCAGAG GTTCATGGTA CAGTATCGTC GTCGATAAAT AGTTTAAACC | 100 |
CTTGGCATCG TGCTGCTGCT GCTTGCAATG CAAATTCTAG TGTGGAAGCT | 150 |
GGAGATAAAT CTTCTAAGTC AATAGCATTA GCATTGGAAT CAAACGGTTC | 200 |
CAAATCACCA TCCAATAGAG ATAATACTGT TAACAAGGAA TCACAAGTCA | 250 |
CAACGTCTCC ACAATCAGCT GGAGATTATA GTGATAAAAA CCAAGAATCT | 300 |
CTGCATCATG GCATCACACA ACCTCCTCCT CACCCTCAAC TTGTTGGCCA | 350 |
CACAGTTGGA TGGGCATCCT CAAATCCATA CCAGGATCCA TATTATGCAG | 400 |
GAGTGATGGG AGCCTATGGA CATCATCCCC TGGGGTTTGT TCCATATGGT | 450 |
GGGATGCCTC ATTCAAGAAT GCCACTGCCG CCTGAGATGG CACAAGAACC | 500 |
AGTTTTCGTG AATGCTAAAC AGTACCAGGC GATTCTGAGG CGAAGGCAGG | 550 |
CACGCGCCAA GGCAGAGCTA GAGAAGAAGC TAATAAAATC CAGAAAGCCT | 600 |
TATCTACATG AATCTCGGCA TCAACATGCT ATGAGGAGGC CAAGGGGTAC | 650 |
TGGAGGACGG TTTGCAAAGA AAACCAACAC CGAAGCTTCA AAGCGTAAAG | 700 |
CTGAAGAAAA GAGCAATGGT CATGTTACTC AGTCCCCGTC ATCATCTAAT | 750 |
TCTGATCAAG GTGAAGCTTG GAATGGTGAC TATAGAACAC CTCAGGGAGA | 800 |
TGAGATGCAG AGCTCAGCTT ATAAGAGAAG GGAAGAAGGA GAGTGTTCAG | 850 |
GGCAGCAATG GAACAGCCTT TCCTCAAACC ATCCTTCTCA AGCTCGTCTA | 900 |
GCCATTAAAT GA | 950 |
>AT3G20910.1 longest ORF length:303
MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA | 50 |
GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES | 100 |
LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG | 150 |
GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP | 200 |
YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN | 250 |
SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL | 300 |
AIK | 350 |
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