fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G20910 NF-YA9 "nuclear factor Y, subunit A9", nuclear factor Y, subunit A9 (.1)

>AT3G20910.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 384
HindIII A|AGCTT 683, 764
HpaI GTT|AAC 229
NdeI CA|TATG 443
PvuII CAG|CTG 266
SacI GAGCT|C 810
StyI C|C[AT][AT]GG 100, 557, 640


Click here to view TAIR data

>AT3G20910.1 length:912
ATGGGAATTG AAGACATGCA TTCAAAATCT GACAGTGGTG GGAACAAGGT 
50
TGATTCAGAG GTTCATGGTA CAGTATCGTC GTCGATAAAT AGTTTAAACC 
100
CTTGGCATCG TGCTGCTGCT GCTTGCAATG CAAATTCTAG TGTGGAAGCT 
150
GGAGATAAAT CTTCTAAGTC AATAGCATTA GCATTGGAAT CAAACGGTTC 
200
CAAATCACCA TCCAATAGAG ATAATACTGT TAACAAGGAA TCACAAGTCA 
250
CAACGTCTCC ACAATCAGCT GGAGATTATA GTGATAAAAA CCAAGAATCT 
300
CTGCATCATG GCATCACACA ACCTCCTCCT CACCCTCAAC TTGTTGGCCA 
350
CACAGTTGGA TGGGCATCCT CAAATCCATA CCAGGATCCA TATTATGCAG 
400
GAGTGATGGG AGCCTATGGA CATCATCCCC TGGGGTTTGT TCCATATGGT 
450
GGGATGCCTC ATTCAAGAAT GCCACTGCCG CCTGAGATGG CACAAGAACC 
500
AGTTTTCGTG AATGCTAAAC AGTACCAGGC GATTCTGAGG CGAAGGCAGG 
550
CACGCGCCAA GGCAGAGCTA GAGAAGAAGC TAATAAAATC CAGAAAGCCT 
600
TATCTACATG AATCTCGGCA TCAACATGCT ATGAGGAGGC CAAGGGGTAC 
650
TGGAGGACGG TTTGCAAAGA AAACCAACAC CGAAGCTTCA AAGCGTAAAG 
700
CTGAAGAAAA GAGCAATGGT CATGTTACTC AGTCCCCGTC ATCATCTAAT 
750
TCTGATCAAG GTGAAGCTTG GAATGGTGAC TATAGAACAC CTCAGGGAGA 
800
TGAGATGCAG AGCTCAGCTT ATAAGAGAAG GGAAGAAGGA GAGTGTTCAG 
850
GGCAGCAATG GAACAGCCTT TCCTCAAACC ATCCTTCTCA AGCTCGTCTA 
900
GCCATTAAAT GA
950

>AT3G20910.1 longest ORF length:303
MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA 
50
GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES 
100
LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG 
150
GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP 
200
YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN 
250
SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL 
300
AIK
350