fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G21175 GATA24, TIFY2B, ZML1 ZIM LIKE 1, GATA TRANSCRIPTION FACTOR 24, ZIM-like 1 (.1.2.3)

>AT3G21175.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 577
PvuII CAG|CTG 185
SalI G|TCGAC 656
StyI C|C[AT][AT]GG 354


Click here to view TAIR data

>AT3G21175.1 length:894
ATGGATGATC TTCATGGAAG AAATGGTCGA ATGCACATTG GTGTAGCGCA 
50
AAATCCAATG CATGTGCAGT ATGAAGATCA CGGTTTGCAC CATATCGACA 
100
ATGAAAACAG TATGATGGAT GACCATGCTG ATGGTGGGAT GGATGAAGGA 
150
GTGGAGACAG ACATTCCTTC TCACCCTGGA AACTCAGCTG ATAATCGTGG 
200
TGAAGTTGTA GACCGTGGAA TTGAAAATGG AGATCAATTG ACATTGTCCT 
250
TCCAGGGACA AGTTTATGTT TTTGACCGTG TCTCGCCTGA GAAGGTTCAA 
300
GCTGTGCTTT TGTTACTTGG TGGAAGGGAA GTACCACATA CACTCCCAAC 
350
AACCCTAGGA TCACCTCATC AGAACAATAG GGTACTGGGT CTATCTGGTA 
400
CTCCTCAACG GCTTAGCGTT CCGCAGCGGT TAGCTTCTTT GCTCAGGTTT 
450
AGGGAGAAAC GAAAAGGGAG GAACTTTGAT AAGACTATTC GCTATACAGT 
500
CAGGAAAGAA GTAGCCTTGA GAATGCAGCG TAAGAAAGGT CAGTTCACGT 
550
CGGCTAAATC AAGCAATGAT GATTCTGGAT CCACTGGATC GGATTGGGGG 
600
TCAAACCAGA GCTGGGCCGT AGAAGGGACT GAGACTCAGA AGCCAGAGGT 
650
TTTATGTCGA CACTGTGGAA CAAGTGAGAA GTCAACTCCA ATGATGCGAC 
700
GTGGACCTGA TGGGCCAAGA ACACTTTGTA ATGCGTGTGG ACTGATGTGG 
750
GCAAACAAGG GGACTCTTAG AGACCTATCC AAAGTCCCTC CTCCGCAAAC 
800
ACCTCAGCAT CTATCTCTGA ATAAGAATGA GGACGCAAAT CTTGAGGCTG 
850
ATCAAATGAT GGAAGTAACT GGTGACATTA GCAACACACA GTGA
900

>AT3G21175.1 longest ORF length:297
MDDLHGRNGR MHIGVAQNPM HVQYEDHGLH HIDNENSMMD DHADGGMDEG 
50
VETDIPSHPG NSADNRGEVV DRGIENGDQL TLSFQGQVYV FDRVSPEKVQ 
100
AVLLLLGGRE VPHTLPTTLG SPHQNNRVLG LSGTPQRLSV PQRLASLLRF 
150
REKRKGRNFD KTIRYTVRKE VALRMQRKKG QFTSAKSSND DSGSTGSDWG 
200
SNQSWAVEGT ETQKPEVLCR HCGTSEKSTP MMRRGPDGPR TLCNACGLMW 
250
ANKGTLRDLS KVPPPQTPQH LSLNKNEDAN LEADQMMEVT GDISNTQ
300