Locus |
Common name |
Short description |
AT3G21175 |
GATA24, TIFY2B, ZML1 |
ZIM LIKE 1, GATA TRANSCRIPTION FACTOR 24, ZIM-like 1 (.1.2.3) |
>AT3G21175.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
577 |
PvuII
| CAG|CTG |
185 |
SalI
| G|TCGAC |
656 |
StyI
| C|C[AT][AT]GG |
354 |
Click here to view TAIR data
>AT3G21175.1 length:894
ATGGATGATC TTCATGGAAG AAATGGTCGA ATGCACATTG GTGTAGCGCA | 50 |
AAATCCAATG CATGTGCAGT ATGAAGATCA CGGTTTGCAC CATATCGACA | 100 |
ATGAAAACAG TATGATGGAT GACCATGCTG ATGGTGGGAT GGATGAAGGA | 150 |
GTGGAGACAG ACATTCCTTC TCACCCTGGA AACTCAGCTG ATAATCGTGG | 200 |
TGAAGTTGTA GACCGTGGAA TTGAAAATGG AGATCAATTG ACATTGTCCT | 250 |
TCCAGGGACA AGTTTATGTT TTTGACCGTG TCTCGCCTGA GAAGGTTCAA | 300 |
GCTGTGCTTT TGTTACTTGG TGGAAGGGAA GTACCACATA CACTCCCAAC | 350 |
AACCCTAGGA TCACCTCATC AGAACAATAG GGTACTGGGT CTATCTGGTA | 400 |
CTCCTCAACG GCTTAGCGTT CCGCAGCGGT TAGCTTCTTT GCTCAGGTTT | 450 |
AGGGAGAAAC GAAAAGGGAG GAACTTTGAT AAGACTATTC GCTATACAGT | 500 |
CAGGAAAGAA GTAGCCTTGA GAATGCAGCG TAAGAAAGGT CAGTTCACGT | 550 |
CGGCTAAATC AAGCAATGAT GATTCTGGAT CCACTGGATC GGATTGGGGG | 600 |
TCAAACCAGA GCTGGGCCGT AGAAGGGACT GAGACTCAGA AGCCAGAGGT | 650 |
TTTATGTCGA CACTGTGGAA CAAGTGAGAA GTCAACTCCA ATGATGCGAC | 700 |
GTGGACCTGA TGGGCCAAGA ACACTTTGTA ATGCGTGTGG ACTGATGTGG | 750 |
GCAAACAAGG GGACTCTTAG AGACCTATCC AAAGTCCCTC CTCCGCAAAC | 800 |
ACCTCAGCAT CTATCTCTGA ATAAGAATGA GGACGCAAAT CTTGAGGCTG | 850 |
ATCAAATGAT GGAAGTAACT GGTGACATTA GCAACACACA GTGA | 900 |
>AT3G21175.1 longest ORF length:297
MDDLHGRNGR MHIGVAQNPM HVQYEDHGLH HIDNENSMMD DHADGGMDEG | 50 |
VETDIPSHPG NSADNRGEVV DRGIENGDQL TLSFQGQVYV FDRVSPEKVQ | 100 |
AVLLLLGGRE VPHTLPTTLG SPHQNNRVLG LSGTPQRLSV PQRLASLLRF | 150 |
REKRKGRNFD KTIRYTVRKE VALRMQRKKG QFTSAKSSND DSGSTGSDWG | 200 |
SNQSWAVEGT ETQKPEVLCR HCGTSEKSTP MMRRGPDGPR TLCNACGLMW | 250 |
ANKGTLRDLS KVPPPQTPQH LSLNKNEDAN LEADQMMEVT GDISNTQ | 300 |
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