Locus |
Common name |
Short description |
AT3G21175 |
GATA24, TIFY2B, ZML1 |
ZIM LIKE 1, GATA TRANSCRIPTION FACTOR 24, ZIM-like 1 (.1.2.3) |
>AT3G21175.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
571 |
PvuII
| CAG|CTG |
185 |
SalI
| G|TCGAC |
650 |
StyI
| C|C[AT][AT]GG |
354 |
Click here to view TAIR data
>AT3G21175.2 length:888
ATGGATGATC TTCATGGAAG AAATGGTCGA ATGCACATTG GTGTAGCGCA | 50 |
AAATCCAATG CATGTGCAGT ATGAAGATCA CGGTTTGCAC CATATCGACA | 100 |
ATGAAAACAG TATGATGGAT GACCATGCTG ATGGTGGGAT GGATGAAGGA | 150 |
GTGGAGACAG ACATTCCTTC TCACCCTGGA AACTCAGCTG ATAATCGTGG | 200 |
TGAAGTTGTA GACCGTGGAA TTGAAAATGG AGATCAATTG ACATTGTCCT | 250 |
TCCAGGGACA AGTTTATGTT TTTGACCGTG TCTCGCCTGA GAAGGTTCAA | 300 |
GCTGTGCTTT TGTTACTTGG TGGAAGGGAA GTACCACATA CACTCCCAAC | 350 |
AACCCTAGGA TCACCTCATC AGAACAATAG GGGTCTATCT GGTACTCCTC | 400 |
AACGGCTTAG CGTTCCGCAG CGGTTAGCTT CTTTGCTCAG GTTTAGGGAG | 450 |
AAACGAAAAG GGAGGAACTT TGATAAGACT ATTCGCTATA CAGTCAGGAA | 500 |
AGAAGTAGCC TTGAGAATGC AGCGTAAGAA AGGTCAGTTC ACGTCGGCTA | 550 |
AATCAAGCAA TGATGATTCT GGATCCACTG GATCGGATTG GGGGTCAAAC | 600 |
CAGAGCTGGG CCGTAGAAGG GACTGAGACT CAGAAGCCAG AGGTTTTATG | 650 |
TCGACACTGT GGAACAAGTG AGAAGTCAAC TCCAATGATG CGACGTGGAC | 700 |
CTGATGGGCC AAGAACACTT TGTAATGCGT GTGGACTGAT GTGGGCAAAC | 750 |
AAGGGGACTC TTAGAGACCT ATCCAAAGTC CCTCCTCCGC AAACACCTCA | 800 |
GCATCTATCT CTGAATAAGA ATGAGGACGC AAATCTTGAG GCTGATCAAA | 850 |
TGATGGAAGT AACTGGTGAC ATTAGCAACA CACAGTGA | 900 |
>AT3G21175.2 longest ORF length:295
MDDLHGRNGR MHIGVAQNPM HVQYEDHGLH HIDNENSMMD DHADGGMDEG | 50 |
VETDIPSHPG NSADNRGEVV DRGIENGDQL TLSFQGQVYV FDRVSPEKVQ | 100 |
AVLLLLGGRE VPHTLPTTLG SPHQNNRGLS GTPQRLSVPQ RLASLLRFRE | 150 |
KRKGRNFDKT IRYTVRKEVA LRMQRKKGQF TSAKSSNDDS GSTGSDWGSN | 200 |
QSWAVEGTET QKPEVLCRHC GTSEKSTPMM RRGPDGPRTL CNACGLMWAN | 250 |
KGTLRDLSKV PPPQTPQHLS LNKNEDANLE ADQMMEVTGD ISNTQ | 300 |
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