fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G21175 GATA24, TIFY2B, ZML1 ZIM LIKE 1, GATA TRANSCRIPTION FACTOR 24, ZIM-like 1 (.1.2.3)

>AT3G21175.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 571
PvuII CAG|CTG 185
SalI G|TCGAC 650
StyI C|C[AT][AT]GG 354


Click here to view TAIR data

>AT3G21175.2 length:888
ATGGATGATC TTCATGGAAG AAATGGTCGA ATGCACATTG GTGTAGCGCA 
50
AAATCCAATG CATGTGCAGT ATGAAGATCA CGGTTTGCAC CATATCGACA 
100
ATGAAAACAG TATGATGGAT GACCATGCTG ATGGTGGGAT GGATGAAGGA 
150
GTGGAGACAG ACATTCCTTC TCACCCTGGA AACTCAGCTG ATAATCGTGG 
200
TGAAGTTGTA GACCGTGGAA TTGAAAATGG AGATCAATTG ACATTGTCCT 
250
TCCAGGGACA AGTTTATGTT TTTGACCGTG TCTCGCCTGA GAAGGTTCAA 
300
GCTGTGCTTT TGTTACTTGG TGGAAGGGAA GTACCACATA CACTCCCAAC 
350
AACCCTAGGA TCACCTCATC AGAACAATAG GGGTCTATCT GGTACTCCTC 
400
AACGGCTTAG CGTTCCGCAG CGGTTAGCTT CTTTGCTCAG GTTTAGGGAG 
450
AAACGAAAAG GGAGGAACTT TGATAAGACT ATTCGCTATA CAGTCAGGAA 
500
AGAAGTAGCC TTGAGAATGC AGCGTAAGAA AGGTCAGTTC ACGTCGGCTA 
550
AATCAAGCAA TGATGATTCT GGATCCACTG GATCGGATTG GGGGTCAAAC 
600
CAGAGCTGGG CCGTAGAAGG GACTGAGACT CAGAAGCCAG AGGTTTTATG 
650
TCGACACTGT GGAACAAGTG AGAAGTCAAC TCCAATGATG CGACGTGGAC 
700
CTGATGGGCC AAGAACACTT TGTAATGCGT GTGGACTGAT GTGGGCAAAC 
750
AAGGGGACTC TTAGAGACCT ATCCAAAGTC CCTCCTCCGC AAACACCTCA 
800
GCATCTATCT CTGAATAAGA ATGAGGACGC AAATCTTGAG GCTGATCAAA 
850
TGATGGAAGT AACTGGTGAC ATTAGCAACA CACAGTGA
900

>AT3G21175.2 longest ORF length:295
MDDLHGRNGR MHIGVAQNPM HVQYEDHGLH HIDNENSMMD DHADGGMDEG 
50
VETDIPSHPG NSADNRGEVV DRGIENGDQL TLSFQGQVYV FDRVSPEKVQ 
100
AVLLLLGGRE VPHTLPTTLG SPHQNNRGLS GTPQRLSVPQ RLASLLRFRE 
150
KRKGRNFDKT IRYTVRKEVA LRMQRKKGQF TSAKSSNDDS GSTGSDWGSN 
200
QSWAVEGTET QKPEVLCRHC GTSEKSTPMM RRGPDGPRTL CNACGLMWAN 
250
KGTLRDLSKV PPPQTPQHLS LNKNEDANLE ADQMMEVTGD ISNTQ
300