fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT3G21810.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 557
HindIII A|AGCTT 28


Click here to view TAIR data

>AT3G21810.1 length:1314
ATGTCTGGGT CGAGTATGTA TAAGACGAAG CTTTGTATTC TGTTCAATAA 
50
GACTGGTGAT TGTTCGAGGC CGAATTGTAC TTTTGCTCAT GGAAATGCTG 
100
AGCTTCGTCG TCCTGGCGAA TCTTCTTTTA CAGGAAGACG TCACAATATG 
150
GATAGTGACT TAAGAGATAG ACGTCACAAT ATGGATAGTG ACTTAAGAGA 
200
TAGACTTGGT AGACAGTTTT CTCCAGAGCG GAGACCTTCC TTAGACAGAA 
250
GTGGAAGACG GGTACAAAGG TTTAGTGGAC ATGACAATTC TATGCCATTT 
300
GAGAATCGAA GAGATAAAGA CTACAGGGAG AACCGTAGAT TTGATGAACG 
350
ACGTGATTAT GCTGGTGGTT TGAAAGTTGG GAATAGGATT GAAGACAGGG 
400
CAGAAGATGG AAGAAATAAG TTTCATGGTT ACAATAATGT TCTGGAAGAG 
450
CAGTTAAAAG ATGTAGAGAT GGATGTTAAG ATGCTAACTG ATGACAAACT 
500
ACGATTGGAG GCGTCCGTTG AAAGGAAGGC ACATGAAGTA GACATTCTTA 
550
CTTCTAGGAT CCAGGAGCTT GAGACCCAGT TGGATAGAGA GAAAGATGAA 
600
TGTAGGAGGA TTACTTCAAG CTCGAAGAAA TTTGTGAAAG AATATAACCG 
650
TTTCTTGCGG GCACAAGATG ATCTAAAGAG GTCAGAAGCC CGTCTTCAGA 
700
AATTGGGAAA CCAACTTAGT ACGTATCTTG CTGGAAGTGA AGGCAATAAT 
750
AGGGATGTAG GCCTGGATAT TGTGAGCGAT GAAGAGACTA ATGGTCGGAA 
800
TTTGAGAACT GCTTGTGATC CACATAACGA GTTGCAGAAT ACTTCTTCAC 
850
TGTCCAGGAA AAAGCATTAT GTGGATCAAT ATACTACGAA AGAACCTGTT 
900
GAAGATGGCT TGATAGGGAG AGGTGAAGAA GAGAAGGTGG AGAATGAGAA 
950
GAAGAGACCA CCTTGTTGGA ATATGCTTTC TTCAAAATCA TATTCTGAAG 
1000
AAGAAAGTGG AGCGTGGAAC GATGAAGACA CAATTAACAG GTCCTCGTCA 
1050
AAGGAAGACA ATTGGAAAAG AAGAAGGTTC TCTATTGGCA CCTCAGCTAC 
1100
CGATAAGGTT ATATTGTCTA CGAGTATGGC AGCTCGGGAA TTTGATGATG 
1150
TTGCAGAATC TGAGGAAGAG AATCCCGAAG CAGCCAACGG CTCTCCTCTC 
1200
ATATCTCTTC CTCCACCCCC ACCTTTCAGA GATGCCCATG TTCAGAGAGA 
1250
CGAGGATGAT GTAAACGGTG ATGTGATGGA ACAGAAGAAA GCCTATGACG 
1300
ATGATTCCGT CTGA
1350

>AT3G21810.1 longest ORF length:437
MSGSSMYKTK LCILFNKTGD CSRPNCTFAH GNAELRRPGE SSFTGRRHNM 
50
DSDLRDRRHN MDSDLRDRLG RQFSPERRPS LDRSGRRVQR FSGHDNSMPF 
100
ENRRDKDYRE NRRFDERRDY AGGLKVGNRI EDRAEDGRNK FHGYNNVLEE 
150
QLKDVEMDVK MLTDDKLRLE ASVERKAHEV DILTSRIQEL ETQLDREKDE 
200
CRRITSSSKK FVKEYNRFLR AQDDLKRSEA RLQKLGNQLS TYLAGSEGNN 
250
RDVGLDIVSD EETNGRNLRT ACDPHNELQN TSSLSRKKHY VDQYTTKEPV 
300
EDGLIGRGEE EKVENEKKRP PCWNMLSSKS YSEEESGAWN DEDTINRSSS 
350
KEDNWKRRRF SIGTSATDKV ILSTSMAARE FDDVAESEEE NPEAANGSPL 
400
ISLPPPPPFR DAHVQRDEDD VNGDVMEQKK AYDDDSV
450