fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G22170 FHY3 far-red elongated hypocotyls 3 (.1.2)

>AT3G22170.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI
Name Recognition sequence Cut positions
BglII A|GATCT 9, 768
EcoRI G|AATTC 744
HindIII A|AGCTT 2196
NcoI C|CATGG 2409
PstI CTGCA|G 1568, 1764
PvuII CAG|CTG 2284
SpeI A|CTAGT 1417
StyI C|C[AT][AT]GG 942, 1621, 2224, 2409
XbaI T|CTAGA 858, 2506
XhoI C|TCGAG 269


Click here to view TAIR data

>AT3G22170.1 length:2520
ATGGATATAG ATCTTCGACT ACATTCAGGT GACCTTTGCA AAGGAGATGA 
50
TGAGGATAGA GGACTTGATA ATGTGTTACA CAATGAAGAA GATATGGATA 
100
TTGGCAAAAT TGAGGATGTT TCTGTTGAGG TTAATACTGA TGACAGTGTA 
150
GGCATGGGTG TTCCAACTGG GGAGTTGGTT GAGTACACTG AGGGTATGAA 
200
TCTTGAACCT CTTAATGGTA TGGAGTTTGA GTCACACGGT GAAGCGTATT 
250
CGTTTTACCA GGAGTATTCT CGAGCTATGG GGTTTAACAC TGCGATACAG 
300
AACAGTCGTA GATCGAAAAC TACAAGAGAG TTTATTGATG CGAAGTTTGC 
350
TTGCTCTAGG TATGGTACTA AAAGAGAATA TGACAAATCT TTTAATCGGC 
400
CACGAGCTAG ACAAAGTAAG CAAGATCCAG AGAATATGGC TGGTAGGAGA 
450
ACATGTGCGA AAACCGATTG CAAAGCTAGT ATGCATGTTA AGAGAAGGCC 
500
GGATGGGAAA TGGGTAATTC ACAGCTTTGT GAGGGAGCAT AATCATGAGC 
550
TTTTACCTGC ACAAGCTGTG AGTGAACAGA CCAGAAAGAT ATATGCTGCA 
600
ATGGCTAAGC AGTTTGCTGA GTACAAAACT GTTATAAGTC TAAAAAGCGA 
650
TTCGAAAAGT TCTTTTGAAA AAGGTCGGAC TTTATCAGTG GAAACAGGGG 
700
ATTTCAAAAT CCTGCTTGAC TTCTTGTCAC GGATGCAATC CTTGAATTCC 
750
AACTTCTTTT ATGCAGTAGA TCTGGGCGAT GATCAGCGAG TGAAGAATGT 
800
ATTTTGGGTA GATGCAAAGA GCAGGCATAA CTATGGCAGT TTTTGTGATG 
850
TTGTTTCTCT AGACACCACC TACGTAAGAA ACAAGTACAA GATGCCACTT 
900
GCTATTTTTG TTGGAGTGAA CCAGCACTAC CAGTATATGG TCCTTGGGTG 
950
CGCCTTAATA TCCGATGAGA GTGCAGCAAC ATATTCTTGG TTAATGGAGA 
1000
CCTGGCTGAG AGCAATCGGT GGACAAGCTC CAAAGGTTTT GATCACTGAG 
1050
CTAGACGTTG TAATGAACTC CATTGTTCCC GAAATCTTCC CCAATACACG 
1100
GCATTGCCTT TTTCTTTGGC ATGTATTGAT GAAGGTTTCT GAGAATCTTG 
1150
GTCAAGTTGT TAAGCAACAT GATAATTTTA TGCCTAAGTT TGAGAAGTGC 
1200
ATCTATAAAT CAGGGAAAGA TGAAGACTTT GCGAGAAAAT GGTATAAGAA 
1250
TCTTGCTAGA TTCGGCCTCA AAGATGATCA ATGGATGATT TCTTTATATG 
1300
AAGACCGCAA GAAATGGGCA CCAACCTACA TGACTGATGT TCTTTTGGCT 
1350
GGGATGTCTA CATCTCAACG AGCTGATAGT ATTAATGCTT TCTTCGACAA 
1400
GTATATGCAT AAGAAGACTA GTGTACAAGA ATTTGTAAAG GTATATGATA 
1450
CAGTTTTGCA AGATAGATGT GAAGAAGAAG CCAAAGCTGA TTCTGAAATG 
1500
TGGAACAAGC AGCCAGCAAT GAAGTCTCCA TCGCCATTTG AGAAGAGTGT 
1550
TTCTGAAGTC TATACTCCTG CAGTTTTCAA AAAGTTCCAG ATTGAAGTTT 
1600
TGGGTGCGAT TGCGTGTAGT CCTAGGGAGG AGAACCGAGA TGCCACATGT 
1650
TCTACTTTTA GAGTGCAGGA TTTTGAAAAC AACCAAGACT TCATGGTAAC 
1700
ATGGAACCAA ACAAAGGCTG AAGTCTCTTG CATCTGTCGG TTATTTGAGT 
1750
ATAAAGGGTA TCTCTGCAGA CACACTCTTA ATGTTCTTCA GTGTTGTCAT 
1800
CTTTCTTCCA TCCCCTCGCA GTACATATTG AAGCGGTGGA CAAAAGATGC 
1850
AAAAAGCCGG CATTTTTCAG GAGAACCTCA GCAGTTGCAG ACTAGGCTGC 
1900
TGCGGTATAA CGATTTGTGC GAACGAGCAT TAAAGCTGAA TGAAGAGGCA 
1950
TCCCTCTCTC AAGAGAGTTA CAATATTGCA TTCCTTGCTA TTGAAGGAGC 
2000
TATAGGAAAC TGTGCTGGTA TTAATACTTC CGGCAGAAGT CTTCCAGATG 
2050
TTGTAACGTC ACCAACTCAA GGTCTGATTT CTGTGGAGGA GGACAACCAT 
2100
AGCAGAAGTG CAGGCAAAAC CAGCAAGAAA AAGAATCCAA CTAAGAAAAG 
2150
AAAAGTGAAC CCAGAGCAGG ATGTTATGCC AGTTGCAGCG CCAGAAAGCT 
2200
TGCAACAGAT GGATAAGCTG AGCCCAAGGA CGGTTGGCAT TGAAAGCTAT 
2250
TATGGAACAC AGCAGAGCGT ACAAGGAATG GTCCAGCTGA ACTTAATGGG 
2300
GCCAACTCGC GATAATTTCT ATGGGAATCA ACAAACAATG CAAGGATTGC 
2350
GACAGTTGAA CTCGATAGCA CCAAGCTACG ACAGTTACTA CGGTCCTCAG 
2400
CAAGGCATCC ATGGACAGGG AGTAGATTTC TTCAGGCCTG CCAATTTTTC 
2450
TTACGACATC CGGGATGATC CTAATGTGAG GACTACGCAG TTGCATGAGG 
2500
ACGCGTCTAG ACACTCGTAA 
2550

>AT3G22170.1 longest ORF length:839
MDIDLRLHSG DLCKGDDEDR GLDNVLHNEE DMDIGKIEDV SVEVNTDDSV 
50
GMGVPTGELV EYTEGMNLEP LNGMEFESHG EAYSFYQEYS RAMGFNTAIQ 
100
NSRRSKTTRE FIDAKFACSR YGTKREYDKS FNRPRARQSK QDPENMAGRR 
150
TCAKTDCKAS MHVKRRPDGK WVIHSFVREH NHELLPAQAV SEQTRKIYAA 
200
MAKQFAEYKT VISLKSDSKS SFEKGRTLSV ETGDFKILLD FLSRMQSLNS 
250
NFFYAVDLGD DQRVKNVFWV DAKSRHNYGS FCDVVSLDTT YVRNKYKMPL 
300
AIFVGVNQHY QYMVLGCALI SDESAATYSW LMETWLRAIG GQAPKVLITE 
350
LDVVMNSIVP EIFPNTRHCL FLWHVLMKVS ENLGQVVKQH DNFMPKFEKC 
400
IYKSGKDEDF ARKWYKNLAR FGLKDDQWMI SLYEDRKKWA PTYMTDVLLA 
450
GMSTSQRADS INAFFDKYMH KKTSVQEFVK VYDTVLQDRC EEEAKADSEM 
500
WNKQPAMKSP SPFEKSVSEV YTPAVFKKFQ IEVLGAIACS PREENRDATC 
550
STFRVQDFEN NQDFMVTWNQ TKAEVSCICR LFEYKGYLCR HTLNVLQCCH 
600
LSSIPSQYIL KRWTKDAKSR HFSGEPQQLQ TRLLRYNDLC ERALKLNEEA 
650
SLSQESYNIA FLAIEGAIGN CAGINTSGRS LPDVVTSPTQ GLISVEEDNH 
700
SRSAGKTSKK KNPTKKRKVN PEQDVMPVAA PESLQQMDKL SPRTVGIESY 
750
YGTQQSVQGM VQLNLMGPTR DNFYGNQQTM QGLRQLNSIA PSYDSYYGPQ 
800
QGIHGQGVDF FRPANFSYDI RDDPNVRTTQ LHEDASRHS
850