fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G22760 SOL1 Tesmin/TSO1-like CXC domain-containing protein (.1)

>AT3G22760.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 263, 1015
NcoI C|CATGG 1753
NdeI CA|TATG 84
PstI CTGCA|G 1451
SalI G|TCGAC 1746
StyI C|C[AT][AT]GG 1753


Click here to view TAIR data

>AT3G22760.1 length:1830
ATGGATACAC CGGAAAAGAG TGAAACCCAG ATCGGTACTC CAGTTTCTAA 
50
ACTCAAAGTC GAGGATTCAC CAGTGTTTAG TTACATATGC AATCTCTCAC 
100
CAATTAAGAC TATCAAACCA ATTCCAATCA CTTGTCCTTT AAGCTCTCTC 
150
AATTACGCAT CTCCACCTTC TGTTTTCACT TCTCCTCACG CGGTTTCTCA 
200
TAAAGAGTCT CGTTTCAGAA GTCAAAAAGA TGTGTCTGCT TCTAAAGAAG 
250
TTGGAGAAGA AGAAGCTTTA GTCGGTAGCG AACCGGAACA AAGCTACAAG 
300
AATGACTGCA ATACTCCTAG AGTTACCAAT GATGTGAAAG ACAATGGTTG 
350
TGGGAAGGAT TTGCAGGTGA TGATGGACAA TGTCAAGAAG AAAAGTGATA 
400
CTCCGGATTG GGAAACTTTG ATTGCTGCTA CAACAGAACT GATTTATGGC 
450
TCACCGAGAG AGTCAGAGGC TTTTAGTTGC TTGTTGAAGA AAACTTCAAA 
500
CTCTGAAGCA CGTCTACGTG GTAGTATAAC TGCAACATCG GTGGCTGTTA 
550
CGAATACCGA TGTAGTCAAC AATGAATCTG AATCTGTTGA TGCTCTTTCG 
600
ATATTGCACC GTGGTGTGAG AAGACGGTGT TTAGACTTTG AGGTTAAGGG 
650
GAATAATCAG CAAACATTAG GAGAATCTTC ATCTAGTTGT GTAGTACCTA 
700
GCATTGGTCT GCATCTTAAC ACCATTGCAA TGTCCTCTAA GGACAAGAAT 
750
GTTGCTAATG AGTATTCATT TTCCGGTAAC ATAAAAGTCG GTGTGCAAAG 
800
TTCTCTGACT CCGGTGCTTC ATTCGCAGCA CGACATCGTG AGAGAAAATG 
850
AAAGCGGGAA AGATTCAGGA CAAATTATAG AAGTGGTTCC AAAGTCTTTA 
900
GCTTCAGTAG ACTTGACTCC AATAAGCCCC AAGAAGAAAA GGCGTAAGTC 
950
CGAACAATCA GGAGAAGGCG ACTCGTCATG TAAACGGTGC AACTGCAAAA 
1000
AATCCAAGTG TTTGAAGCTT TACTGTGAAT GCTTTGCTGC TGGATTTTAT 
1050
TGCATAGAGC CATGTTCATG TATAAATTGC TTCAACAAAC CTATCCATAA 
1100
AGATGTTGTC CTGGCTACTC GCAAACAGAT TGAATCCCGC AATCCACTTG 
1150
CATTTGCTCC TAAAGTCATC AGAAACTCAG ATTCCATCAT TGAAGTTGGT 
1200
GAGGATGCAA GTAAAACTCC AGCTTCAGCG CGACACAAAC GAGGCTGTAA 
1250
CTGCAAGAAA TCAAACTGTC TGAAGAAATA CTGTGAATGC TATCAGGGCG 
1300
GAGTTGGTTG TTCTATAAAC TGTAGATGTG AAGGATGTAA AAATGCATTT 
1350
GGCAGAAAAG ATGGGTCTTT GTTCGAACAA GATGAGGAGA ATGAAACATC 
1400
TGGCACACCC GGAACAAAGA AAACACAACA GAATGTCGAG TTGTTCAAAC 
1450
CTGCAGCTCC ACCTTCAACA CCAATTCCAT TTAGACAACC ACTGGCGCAA 
1500
CTTCCAATCT CATCCAACAA CAGACTGCTA CCTCCACAGT CTCATTTTCA 
1550
TCATGGAGCT ATTGGATCAT CTTCCTCAGG GATATACAAC ATCAGAAAAC 
1600
CAGACATGAG TTTGTTGTCT CATTCAAGAA TCGAGACAAT CACAGAGGAT 
1650
ATTGATGATA TGTCTGAGAA TCTAATCCAT TCTCCAATAA CTACTCTATC 
1700
TCCCAACAGC AAAAGGGTTT CGTTGTCTCA TCTTGATTCA CCAGAGTCGA 
1750
CTCCATGGAG AAGAAATGGT GGGGGGAGGA ATCTGATACG TTCGTTCCCA 
1800
ACGTTTCCTT CTCTCACTCC ACACCATTAA 
1850

>AT3G22760.1 longest ORF length:609
MDTPEKSETQ IGTPVSKLKV EDSPVFSYIC NLSPIKTIKP IPITCPLSSL 
50
NYASPPSVFT SPHAVSHKES RFRSQKDVSA SKEVGEEEAL VGSEPEQSYK 
100
NDCNTPRVTN DVKDNGCGKD LQVMMDNVKK KSDTPDWETL IAATTELIYG 
150
SPRESEAFSC LLKKTSNSEA RLRGSITATS VAVTNTDVVN NESESVDALS 
200
ILHRGVRRRC LDFEVKGNNQ QTLGESSSSC VVPSIGLHLN TIAMSSKDKN 
250
VANEYSFSGN IKVGVQSSLT PVLHSQHDIV RENESGKDSG QIIEVVPKSL 
300
ASVDLTPISP KKKRRKSEQS GEGDSSCKRC NCKKSKCLKL YCECFAAGFY 
350
CIEPCSCINC FNKPIHKDVV LATRKQIESR NPLAFAPKVI RNSDSIIEVG 
400
EDASKTPASA RHKRGCNCKK SNCLKKYCEC YQGGVGCSIN CRCEGCKNAF 
450
GRKDGSLFEQ DEENETSGTP GTKKTQQNVE LFKPAAPPST PIPFRQPLAQ 
500
LPISSNNRLL PPQSHFHHGA IGSSSSGIYN IRKPDMSLLS HSRIETITED 
550
IDDMSENLIH SPITTLSPNS KRVSLSHLDS PESTPWRRNG GGRNLIRSFP 
600
TFPSLTPHH
650