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| Locus | Common name | Short description |
| AT3G22780 | ATTSO1, TSO1 | CHINESE FOR 'UGLY', Tesmin/TSO1-like CXC domain-containing protein (.1) |
>AT3G22780.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 312 |
| EcoRV | GAT|ATC | 700 |
| HindIII | A|AGCTT | 326, 452, 1234 |
| NdeI | CA|TATG | 1631 |
| XhoI | C|TCGAG | 470, 906 |
Click here to view TAIR data
>AT3G22780.1 length:2088
ATGGACAAAT CCCAGAAGAA TCCTACTTCC CAGATCGGAA CTTCAACTCC | 50 |
CAAATCCAAA TTCGAGGATT CTCCAGTGTT CAACTACATA AGCAACCTCT | 100 |
CTCCAATTGA GTCGGTCAAA TCTATCTCCA CTGCTCAAAC GTTTAGCTCT | 150 |
CTTAGTTTCA CATCTCCTCC TCCTGTGTTT ACTTCTCCTC ACGTCATTTC | 200 |
TCACAGAGAA TCCAGATTCT TCAGATGTCA TAACTCTGTT GATCGTTCAA | 250 |
AGCACTTAGA ATCTTTAGAT GGATCTGCTG TTAAAGGAGA AGTTGTAGTA | 300 |
CCATTAGTTG AAGATCTAAA TAAAGAAGCT TCTTTGGAAG ATGAAGAAGA | 350 |
AACTTCTGTT GAAACGTCTT CTGAGCTGCC ACAGATCATG AAGTTCGATA | 400 |
GCCAAACTTC TGAGCATAGT GATTCACCTT GCACTGAAGA TGTTGTTATT | 450 |
GAAGCTTCAT CTGATCCTCC TCGAGGAGAC AATGGTTCGT CATCCGAGGA | 500 |
TGTCACGATG GGACTTCAGA ATATGCTTGT TGTTCGGGAA GGGAATGACA | 550 |
CTCCTGGTTG TGGACGTTTG ATCTCAGATG CAACTGAGCT GTTAGTATTT | 600 |
CGATCTCCGA ATGATTCTGA GGCTTTTAGA TGCTTGGTCG ATAAAATATC | 650 |
AAGCTCAGAA AGACGGTTCT GTGCTGGTGT CAAGTCTACA AAGCGGCCTG | 700 |
ATATCAACAA AGATATTCCA GCCAATGGAT CTAGTAATGA AAATCAGCCT | 750 |
TTGGCTGTGC TTCCTACAAA CGAGTCTGTC TTTAACTTGC ATCGTGGTGG | 800 |
CATGCGAAGA CGCTGCCTTG ACTTTGAGAT GCCAGGGAAA CGGAAGAAGG | 850 |
ATATTGTTGA TGATCAGCAA TCTGTGTGTG ACAATAATGT GGCTGGTGAA | 900 |
TCTTCCTCGA GCTGTGTTGT ACCTGGTATT GGTCTTCATC TAAACGCCGT | 950 |
TGCAATGTCT GCAAAGGACA GTAACATCAG TGTCATACAT GGCTATTCCA | 1000 |
TATCTGGAGA GATTCAAAAG AGTTTCTCAG GCTCTACCAC TCCAATTCAG | 1050 |
TCCCAAGACA CTGTGCAAGA AACTTCGGAC CAGGCAGAAA ACGAACCTGT | 1100 |
AGAAGAAGTT CCCAAAGCAT TGGTGTTCCC AGAGTTGAAT CTAGGCAGCC | 1150 |
TTAAGAAAAA GATGCGTAAA TCTGAACAAG CTGGGGAGGG TGAGTCATGT | 1200 |
AAACGATGCA ACTGCAAAAA GTCTAAGTGT TTGAAGCTTT ACTGTGAATG | 1250 |
CTTTGCTGCT GGGGTTTATT GCATAGAGCC ATGTTCATGT ATAGATTGCT | 1300 |
TCAACAAACC TATCCATGAA GAAACTGTTT TGGCTACCCG CAAACAGATT | 1350 |
GAATCCCGAA ATCCACTTGC ATTTGCTCCT AAAGTCATCA GAAATGCAGA | 1400 |
TTCCATCATG GAAGCTAGTG ATGATGCCAG TAAAACCCCG GCTTCTGCAC | 1450 |
GACACAAACG TGGCTGCAAC TGCAAGAAAT CAAACTGTAT GAAGAAATAC | 1500 |
TGTGAATGCT ATCAGGGTGG AGTCGGCTGT TCCATGAACT GTAGATGCGA | 1550 |
AGGATGCACA AATGTATTCG GCAGAAAAGA TGGGTCTTTA CTTGTTATCA | 1600 |
TGGAAAGCAA ACTAGAGGAG AATCAGGAGA CATATGAGAA AAGAATAGCA | 1650 |
AAAATCCAAC ACAACGTCGA GGTGTCGAAA GAAGTGGAGC AGAACCCAAG | 1700 |
TTCTGATCAA CCTTCGACAC CACTGCCACC GTACAGACAT TTGGTGGTTC | 1750 |
ATCAGCCATT CTTGTCTAAG AACAGACTGC CTCCGACACA GTTTTTTCTT | 1800 |
GGCACAGGTT CTTCCTCTTT CAGAAAACCA AACAGTGATT TGGCGCAATC | 1850 |
ACAGAATGAG AAGAAGCCTC TTGAAACTGT GACTGAGGAC AAAACAGAGA | 1900 |
TTATGCCTGA GATTCTCCTC AATTCCCCTA TAGCTAACAT CAAGGCCATC | 1950 |
TCTCCCAACA GCAAGAGAGT CTCTCCCCCT CAACCCGGCT CCTCGGAGTC | 2000 |
AGGCTCAATC CTAAGGAGAA GAGGTAATGG CCGGAAGCTG ATACTACGGT | 2050 |
CTATTCCAGC ATTTCCTTCT CTCAACCCAA ATCAGTGA | 2100 |
>AT3G22780.1 longest ORF length:695
MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS | 50 |
LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV | 100 |
PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI | 150 |
EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF | 200 |
RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP | 250 |
LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE | 300 |
SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ | 350 |
SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC | 400 |
KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI | 450 |
ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY | 500 |
CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA | 550 |
KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL | 600 |
GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI | 650 |
SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ | 700 |