fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G23030 IAA2 indole-3-acetic acid inducible 2 (.1)

>AT3G23030.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 490
BglII A|GATCT 202
NcoI C|CATGG 442
SacI GAGCT|C 257
StyI C|C[AT][AT]GG 442
XbaI T|CTAGA 507


Click here to view TAIR data

>AT3G23030.1 length:525
ATGGCGTACG AGAAAGTCAA CGAGCTTAAC CTTAAGGACA CAGAGCTATG 
50
TCTTGGATTA CCCGGAAGAA CAGAGAAGAT CAAAGAAGAA CAAGAGGTTT 
100
CTTGCGTTAA AAGTAACAAC AAGCGTCTAT TTGAGGAAAC TCGTGATGAA 
150
GAAGAATCTA CACCTCCTAC CAAAACTCAA ATCGTTGGTT GGCCACCAGT 
200
GAGATCTTCC CGTAAGAACA ACAACAGTGT GAGCTACGTG AAAGTGAGTA 
250
TGGACGGAGC TCCTTACCTT CGCAAGATCG ATCTCAAGAC ATACAAAAAC 
300
TACCCCGAGC TTCTCAAAGC GTTAGAGAAT ATGTTCAAAG TCATGATTGG 
350
TGAATATTGT GAGAGAGAAG GATACAAAGG ATCTGGATTT GTACCAACAT 
400
ACGAAGATAA AGATGGTGAC TGGATGTTGG TTGGTGATGT TCCATGGGAC 
450
ATGTTCTCTT CTTCTTGTAA GAGACTCAGA ATCATGAAGG GATCCGACGC 
500
TCCTGCTCTA GACTCTTCCT TATGA
550

>AT3G23030.1 longest ORF length:174
MAYEKVNELN LKDTELCLGL PGRTEKIKEE QEVSCVKSNN KRLFEETRDE 
50
EESTPPTKTQ IVGWPPVRSS RKNNNSVSYV KVSMDGAPYL RKIDLKTYKN 
100
YPELLKALEN MFKVMIGEYC EREGYKGSGF VPTYEDKDGD WMLVGDVPWD 
150
MFSSSCKRLR IMKGSDAPAL DSSL
200