fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G23140 URO UPRIGHT ROSETTE, C2H2 and C2HC zinc fingers superfamily protein (.1)

>AT3G23140.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 403
StyI C|C[AT][AT]GG 276


Click here to view TAIR data

>AT3G23140.1 length:519
ATGAACCACC GGGACAAACA AATTGATTCC GGCTCTGGCT CTGGAGAAAA 
50
CCGCCGGACT TATGACTGCG ACATCTGCAA GAGAGGTTTC ACGAATCCTC 
100
AAGCCCTCGG TGGTCACAAT AACATCCACC GCAGGGAACG CGAAAGATAC 
150
CCCTCCTCCT CTTCTTCTTC TCACTCATTT CCATTTTCTC TTCCGTTACC 
200
ATCTCAGTCT CCCTCCTCCT CCACAAACTT CACAAACCCT CCTCCTTATT 
250
TTCCGACCAT TGAGTCATAC CTACACCAAG GGTCTCAGCC ACCTATTAAC 
300
CCTAGCCACA ACACACAATA CTTTGGATCA TCATCATCAT CAAGAGGAGG 
350
AGGGAGATTT GCTCAAGGGG CGTCTCATGA TCTTAATTTG AGCTTAGGGC 
400
TCGGATCCAT GAATGAAGAT GATGACACTC ACCGGAGCCC ACCAGAGACC 
450
GGAGGTTCTC AACCTCAAGA TGGTGATCTT GATCTTGATC TTCGACTCGG 
500
CGGTCATCGT CATCATTAA
550

>AT3G23140.1 longest ORF length:172
MNHRDKQIDS GSGSGENRRT YDCDICKRGF TNPQALGGHN NIHRRERERY 
50
PSSSSSSHSF PFSLPLPSQS PSSSTNFTNP PPYFPTIESY LHQGSQPPIN 
100
PSHNTQYFGS SSSSRGGGRF AQGASHDLNL SLGLGSMNED DDTHRSPPET 
150
GGSQPQDGDL DLDLRLGGHR HH
200