Locus |
Common name |
Short description |
AT3G23210 |
bHLH34, bHLH034 |
basic Helix-Loop-Helix 34, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT3G23210.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
676 |
PstI
| CTGCA|G |
344 |
SacI
| GAGCT|C |
555 |
XbaI
| T|CTAGA |
681 |
Click here to view TAIR data
>AT3G23210.1 length:963
ATGTATCCAT CAATCGAAGA CGATGATGAT CTTCTCGCTG CTCTTTGTTT | 50 |
TGATCAAAGC AATGGAGTAG AAGATCCTTA TGGATATATG CAAACAAATG | 100 |
AAGATAACAT ATTTCAGGAT TTTGGGTCTT GTGGTGTGAA TCTGATGCAG | 150 |
CCACAACAAG AACAATTTGA TTCTTTTAAT GGAAATCTTG AGCAAGTTTG | 200 |
TAGTAGCTTT AGAGGAGGAA ACAATGGAGT TGTTTATAGT AGTAGCATTG | 250 |
GATCAGCACA ATTGGATTTG GCTGCATCGT TTAGTGGAGT TTTGCAGCAA | 300 |
GAGACACATC AAGTCTGTGG CTTTAGAGGA CAAAACGACG ATTCTGCAGT | 350 |
GCCTCATTTG CAGCAGCAAC AAGGACAGGT GTTTAGTGGT GTAGTGGAAA | 400 |
TCAATTCTTC GTCATCTGTT GGAGCTGTTA AGGAAGAGTT TGAGGAAGAA | 450 |
TGTTCGGGGA AGAGGAGACG AACTGGATCA TGTAGCAAGC CAGGAACCAA | 500 |
AGCCTGTCGC GAGAAACTAA GAAGGGAAAA GCTAAATGAC AAGTTCATGG | 550 |
ACTTGAGCTC TGTTTTAGAG CCTGGCAGGA CTCCAAAGAC GGATAAATCA | 600 |
GCTATACTCG ACGATGCAAT CCGGGTTGTG AATCAGCTTA GAGGTGAAGC | 650 |
TCATGAGCTT CAAGAAACCA ACCAAAAGCT TCTAGAAGAG ATCAAGAGTC | 700 |
TAAAGGCGGA TAAAAACGAG CTACGAGAGG AAAAGCTGGT GTTGAAGGCG | 750 |
GAGAAGGAGA AGATGGAGCA ACAGTTAAAA TCTATGGTGG TTCCATCACC | 800 |
AGGTTTCATG CCCTCCCAGC ATCCAGCAGC TTTCCATTCC CATAAGATGG | 850 |
CGGTGGCTTA CCCTTACGGC TACTATCCTC CAAACATGCC AATGTGGTCA | 900 |
CCCTTACCTC CTGCTGACCG TGATACGTCT CGTGATCTCA AAAATCTTCC | 950 |
TCCTGTTGCT TAA | 1000 |
>AT3G23210.1 longest ORF length:320
MYPSIEDDDD LLAALCFDQS NGVEDPYGYM QTNEDNIFQD FGSCGVNLMQ | 50 |
PQQEQFDSFN GNLEQVCSSF RGGNNGVVYS SSIGSAQLDL AASFSGVLQQ | 100 |
ETHQVCGFRG QNDDSAVPHL QQQQGQVFSG VVEINSSSSV GAVKEEFEEE | 150 |
CSGKRRRTGS CSKPGTKACR EKLRREKLND KFMDLSSVLE PGRTPKTDKS | 200 |
AILDDAIRVV NQLRGEAHEL QETNQKLLEE IKSLKADKNE LREEKLVLKA | 250 |
EKEKMEQQLK SMVVPSPGFM PSQHPAAFHS HKMAVAYPYG YYPPNMPMWS | 300 |
PLPPADRDTS RDLKNLPPVA | 350 |
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