fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G23250 ATMYB15, ATY19 myb domain protein 15 (.1.2)

>AT3G23250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 837
EcoRV GAT|ATC 589, 640
HindIII A|AGCTT 486, 651
NcoI C|CATGG 46, 93
NheI G|CTAGC 456
SacI GAGCT|C 8, 426
StyI C|C[AT][AT]GG 46, 93


Click here to view TAIR data

>AT3G23250.1 length:858
ATGGGAAGAG CTCCATGCTG TGAGAAGATG GGGTTGAAGA GAGGACCATG 
50
GACACCTGAA GAAGATCAAA TCTTGGTCTC TTTTATCCTC AACCATGGAC 
100
ATAGTAACTG GCGAGCCCTC CCTAAGCAAG CTGGTCTTTT GAGATGTGGA 
150
AAAAGCTGTA GACTTAGGTG GATGAACTAT TTAAAGCCTG ATATTAAACG 
200
TGGCAATTTC ACCAAAGAAG AGGAAGATGC TATCATCAGC TTACACCAAA 
250
TACTTGGCAA TAGATGGTCA GCGATTGCAG CAAAACTGCC TGGAAGAACC 
300
GATAACGAGA TCAAGAACGT ATGGCACACT CACTTGAAGA AGAGACTCGA 
350
AGATTATCAA CCAGCTAAAC CTAAGACCAG CAACAAAAAG AAGGGTACTA 
400
AACCAAAATC TGAATCCGTA ATAACGAGCT CGAACAGTAC TAGAAGCGAA 
450
TCGGAGCTAG CAGATTCATC AAACCCTTCT GGAGAAAGCT TATTTTCGAC 
500
ATCGCCTTCG ACAAGTGAGG TTTCTTCGAT GACACTCATA AGCCACGACG 
550
GCTATAGCAA CGAGATTAAT ATGGATAACA AACCGGGAGA TATCAGTACT 
600
ATCGATCAAG AATGTGTTTC TTTCGAAACT TTTGGTGCGG ATATCGATGA 
650
AAGCTTCTGG AAAGAGACAC TGTATAGCCA AGATGAACAC AACTACGTAT 
700
CGAATGACCT AGAAGTGGCT GGTTTAGTTG AGATACAACA AGAGTTTCAA 
750
AACTTGGGCT CCGCTAATAA TGAGATGATT TTTGACAGTG AGATGGACTT 
800
CTGGTTCGAT GTATTGGCTA GAACCGGCGG GGAACAAGAT CTCTTAGCCG 
850
GGCTCTAG
900

>AT3G23250.1 longest ORF length:285
MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG 
50
KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT 
100
DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE 
150
SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST 
200
IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ 
250
NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
300