Locus |
Common name |
Short description |
AT3G24050 |
GATA1 |
GATA transcription factor 1 (.1) |
>AT3G24050.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
744 |
PvuII
| CAG|CTG |
298 |
StyI
| C|C[AT][AT]GG |
156 |
Click here to view TAIR data
>AT3G24050.1 length:825
ATGGAAATGG AATCATTCAT GGACGACCTT TTGAACTTCT CTGTACCGGA | 50 |
AGAGGAAGAA GACGACGACG AACATACGCA ACCACCGAGG AATATTACTC | 100 |
GCCGGAAAAC TGGATTACGG CCAACAGACT CCTTCGGTCT CTTTAATACC | 150 |
GACGACCTTG GAGTGGTTGA AGAAGAGGAT TTGGAATGGA TTTCAAACAA | 200 |
AAATGCTTTT CCGGTGATTG AAACATTCGT CGGTGTATTA CCGTCGGAGC | 250 |
ATTTTCCTAT AACGTCTCTT CTGGAAAGAG AAGCGACTGA GGTAAAACAG | 300 |
CTGAGTCCGG TTTCAGTACT TGAGACGAGT AGCCATAGCT CCACAACGAC | 350 |
TACCTCAAAC AGTAGCGGCG GAAGTAACGG AAGCACGGCC GTGGCTACGA | 400 |
CCACCACCAC TCCAACAATA ATGAGCTGTT GCGTTGGTTT TAAAGCGCCG | 450 |
GCTAAAGCGA GAAGCAAGCG TCGTCGTACA GGACGCCGTG ATTTACGAGT | 500 |
TTTGTGGACA GGAAACGAGC AAGGAGGAAT ACAGAAGAAG AAGACGATGA | 550 |
CTGTGGCGGC GGCTGCGTTG ATTATGGGAA GGAAGTGTCA ACACTGTGGA | 600 |
GCGGAGAAGA CTCCGCAATG GAGGGCAGGA CCAGCGGGGC CTAAGACTCT | 650 |
GTGTAACGCT TGTGGCGTGA GGTATAAGTC CGGGAGGCTA GTTCCGGAGT | 700 |
ATCGTCCAGC GAACAGTCCA ACTTTCACGG CGGAGTTACA TTCGAATTCT | 750 |
CACCGGAAGA TTGTAGAGAT GAGGAAGCAG TATCAGTCCG GTGACGGTGA | 800 |
CGGTGATCGG AAAGATTGTG GATAA | 850 |
>AT3G24050.1 longest ORF length:274
MEMESFMDDL LNFSVPEEEE DDDEHTQPPR NITRRKTGLR PTDSFGLFNT | 50 |
DDLGVVEEED LEWISNKNAF PVIETFVGVL PSEHFPITSL LEREATEVKQ | 100 |
LSPVSVLETS SHSSTTTTSN SSGGSNGSTA VATTTTTPTI MSCCVGFKAP | 150 |
AKARSKRRRT GRRDLRVLWT GNEQGGIQKK KTMTVAAAAL IMGRKCQHCG | 200 |
AEKTPQWRAG PAGPKTLCNA CGVRYKSGRL VPEYRPANSP TFTAELHSNS | 250 |
HRKIVEMRKQ YQSGDGDGDR KDCG | 300 |
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