fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G24050 GATA1 GATA transcription factor 1 (.1)

>AT3G24050.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 744
PvuII CAG|CTG 298
StyI C|C[AT][AT]GG 156


Click here to view TAIR data

>AT3G24050.1 length:825
ATGGAAATGG AATCATTCAT GGACGACCTT TTGAACTTCT CTGTACCGGA 
50
AGAGGAAGAA GACGACGACG AACATACGCA ACCACCGAGG AATATTACTC 
100
GCCGGAAAAC TGGATTACGG CCAACAGACT CCTTCGGTCT CTTTAATACC 
150
GACGACCTTG GAGTGGTTGA AGAAGAGGAT TTGGAATGGA TTTCAAACAA 
200
AAATGCTTTT CCGGTGATTG AAACATTCGT CGGTGTATTA CCGTCGGAGC 
250
ATTTTCCTAT AACGTCTCTT CTGGAAAGAG AAGCGACTGA GGTAAAACAG 
300
CTGAGTCCGG TTTCAGTACT TGAGACGAGT AGCCATAGCT CCACAACGAC 
350
TACCTCAAAC AGTAGCGGCG GAAGTAACGG AAGCACGGCC GTGGCTACGA 
400
CCACCACCAC TCCAACAATA ATGAGCTGTT GCGTTGGTTT TAAAGCGCCG 
450
GCTAAAGCGA GAAGCAAGCG TCGTCGTACA GGACGCCGTG ATTTACGAGT 
500
TTTGTGGACA GGAAACGAGC AAGGAGGAAT ACAGAAGAAG AAGACGATGA 
550
CTGTGGCGGC GGCTGCGTTG ATTATGGGAA GGAAGTGTCA ACACTGTGGA 
600
GCGGAGAAGA CTCCGCAATG GAGGGCAGGA CCAGCGGGGC CTAAGACTCT 
650
GTGTAACGCT TGTGGCGTGA GGTATAAGTC CGGGAGGCTA GTTCCGGAGT 
700
ATCGTCCAGC GAACAGTCCA ACTTTCACGG CGGAGTTACA TTCGAATTCT 
750
CACCGGAAGA TTGTAGAGAT GAGGAAGCAG TATCAGTCCG GTGACGGTGA 
800
CGGTGATCGG AAAGATTGTG GATAA
850

>AT3G24050.1 longest ORF length:274
MEMESFMDDL LNFSVPEEEE DDDEHTQPPR NITRRKTGLR PTDSFGLFNT 
50
DDLGVVEEED LEWISNKNAF PVIETFVGVL PSEHFPITSL LEREATEVKQ 
100
LSPVSVLETS SHSSTTTTSN SSGGSNGSTA VATTTTTPTI MSCCVGFKAP 
150
AKARSKRRRT GRRDLRVLWT GNEQGGIQKK KTMTVAAAAL IMGRKCQHCG 
200
AEKTPQWRAG PAGPKTLCNA CGVRYKSGRL VPEYRPANSP TFTAELHSNS 
250
HRKIVEMRKQ YQSGDGDGDR KDCG
300