fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G24120 Homeodomain-like superfamily protein (.1.2)

>AT3G24120.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 551
NcoI C|CATGG 57
NheI G|CTAGC 624
PvuII CAG|CTG 502
SacI GAGCT|C 795
StyI C|C[AT][AT]GG 57, 282


Click here to view TAIR data

>AT3G24120.2 length:897
ATGTACTCAG CGATTCGCTC GCTTCCACTC GATGGTGGAC ACGTTGGTGG 
50
TGACTACCAT GGACCTCTTG ACGGAACCAA TCTTCCCGGT GACGCTTGTT 
100
TGGTTTTAAC GACTGACCCT AAACCTCGTC TCCGGTGGAC AACTGAGCTT 
150
CATGAGAGAT TCGTTGACGC CGTTACTCAG CTCGGTGGTC CTGACAAAGC 
200
GACTCCCAAA ACTATTATGA GAACAATGGG AGTGAAGGGT CTCACTCTCT 
250
ACCACCTCAA ATCACATCTT CAGAAATTCC GCCTAGGGAG GCAAGCTGGC 
300
AAAGAATCAA CTGAGAACTC TAAAGATGCT TCTTGTGTAG GGGAGAGTCA 
350
GGACACAGGT TCATCTTCGA CATCATCAAT GAGAATGGCG CAGCAGGAGC 
400
AGAACGAGGG TTACCAAGTC ACCGAAGCTC TACGTGCTCA GATGGAAGTC 
450
CAAAGAAGAC TACACGATCA ATTGGAGTAT GGGCAGGTGC AACGGAGGCT 
500
CCAGCTGAGG ATAGAGGCAC AAGGAAAATA CCTGCAATCG ATTCTTGAAA 
550
AAGCTTGCAA GGCCTTTGAC GAGCAAGCTG CTACTTTTGC TGGACTTGAG 
600
GCTGCTAGGG AAGAGCTATC AGAGCTAGCC ATCAAAGTCT CCAATAGCTC 
650
TCAAGGAACA TCAGTCCCGT ACTTCGATGC AACAAAGATG ATGATGATGC 
700
CATCGTTGTC AGAGCTTGCA GTAGCAATAG ACAACAAAAA CAACATCACA 
750
ACCAACTGTT CAGTAGAAAG CTCTCTGACT TCCATCACAC ATGGGAGCTC 
800
TATATCTGCT GCATCAATGA AGAAGCGTCA ACGTGGAGAC AATTTGGGCG 
850
TAGGGTATGA ATCAGGCTGG ATTATGCCTA GTAGCACCAT TGGATAA
900

>AT3G24120.2 longest ORF length:298
MYSAIRSLPL DGGHVGGDYH GPLDGTNLPG DACLVLTTDP KPRLRWTTEL 
50
HERFVDAVTQ LGGPDKATPK TIMRTMGVKG LTLYHLKSHL QKFRLGRQAG 
100
KESTENSKDA SCVGESQDTG SSSTSSMRMA QQEQNEGYQV TEALRAQMEV 
150
QRRLHDQLEY GQVQRRLQLR IEAQGKYLQS ILEKACKAFD EQAATFAGLE 
200
AAREELSELA IKVSNSSQGT SVPYFDATKM MMMPSLSELA VAIDNKNNIT 
250
TNCSVESSLT SITHGSSISA ASMKKRQRGD NLGVGYESGW IMPSSTIG
300