fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G24140 bHLH097, FMA FAMA, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G24140.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 652
NcoI C|CATGG 1082
PvuII CAG|CTG 1015
SacI GAGCT|C 730
StyI C|C[AT][AT]GG 1082
XhoI C|TCGAG 733


Click here to view TAIR data

>AT3G24140.1 length:1245
ATGGATAAAG ATTACTCGGC ACCAAACTTC TTAGGTGAAT CCTCAGGCGG 
50
TAACGATGAT AACAGCTCTG GTATGATAGA CTATATGTTC AATAGAAACC 
100
TTCAACAACA ACAAAAGCAA TCGATGCCAC AACAGCAGCA ACATCAACTC 
150
TCTCCTTCCG GATTTGGAGC AACACCTTTT GATAAAATGA ACTTCTCTGA 
200
TGTGATGCAG TTTGCGGACT TCGGTTCGAA ACTTGCGTTG AACCAGACCA 
250
GAAACCAAGA CGATCAAGAA ACCGGGATTG ACCCCGTTTA TTTCTTGAAG 
300
TTCCCTGTCT TGAACGACAA AATAGAGGAC CATAACCAAA CCCAACATCT 
350
CATGCCTTCT CATCAGACGT CTCAAGAAGG AGGTGAGTGT GGAGGAAACA 
400
TAGGCAATGT GTTTCTTGAA GAAAAAGAAG ATCAAGACGA TGACAACGAC 
450
AACAACTCCG TGCAACTACG TTTTATTGGA GGAGAAGAAG AAGATAGGGA 
500
GAACAAGAAT GTTACGAAAA AGGAGGTGAA GAGCAAGAGG AAGAGAGCTA 
550
GAACGAGCAA GACCAGCGAA GAAGTGGAAA GCCAACGGAT GACTCATATC 
600
GCGGTCGAAA GAAACCGTAG GAAGCAAATG AATGAGCATC TTCGTGTCCT 
650
TAGATCTCTC ATGCCTGGCT CCTACGTTCA AAGGGGAGAC CAAGCGTCAA 
700
TCATAGGAGG AGCAATAGAG TTTGTGAGAG AGCTCGAGCA ACTCCTACAA 
750
TGTCTTGAAT CACAGAAGCG TCGAAGAATC TTAGGAGAAA CCGGTAGGGA 
800
CATGACAACG ACAACGACTT CTTCTTCTTC TCCCATAACT ACGGTAGCGA 
850
ACCAAGCACA ACCGCTCATT ATTACGGGAA ATGTAACCGA GCTAGAGGGC 
900
GGAGGAGGGC TTCGGGAGGA GACTGCGGAG AACAAGTCGT GCTTGGCTGA 
950
CGTGGAGGTG AAGCTGCTAG GGTTTGACGC CATGATCAAG ATACTTTCAA 
1000
GAAGAAGGCC GGGACAGCTG ATTAAGACTA TAGCTGCTTT GGAGGATCTT 
1050
CATCTCTCTA TTCTTCACAC TAACATCACT ACCATGGAAC AAACCGTCCT 
1100
CTACTCCTTT AATGTCAAGA TAACAAGTGA AACGAGGTTT ACGGCAGAAG 
1150
ACATAGCAAG TTCCATCCAA CAGATATTTA GTTTCATTCA TGCAAATACC 
1200
AACATATCTG GAAGCTCTAA CCTGGGAAAT ATTGTGTTTA CTTGA
1250

>AT3G24140.1 longest ORF length:414
MDKDYSAPNF LGESSGGNDD NSSGMIDYMF NRNLQQQQKQ SMPQQQQHQL 
50
SPSGFGATPF DKMNFSDVMQ FADFGSKLAL NQTRNQDDQE TGIDPVYFLK 
100
FPVLNDKIED HNQTQHLMPS HQTSQEGGEC GGNIGNVFLE EKEDQDDDND 
150
NNSVQLRFIG GEEEDRENKN VTKKEVKSKR KRARTSKTSE EVESQRMTHI 
200
AVERNRRKQM NEHLRVLRSL MPGSYVQRGD QASIIGGAIE FVRELEQLLQ 
250
CLESQKRRRI LGETGRDMTT TTTSSSSPIT TVANQAQPLI ITGNVTELEG 
300
GGGLREETAE NKSCLADVEV KLLGFDAMIK ILSRRRPGQL IKTIAALEDL 
350
HLSILHTNIT TMEQTVLYSF NVKITSETRF TAEDIASSIQ QIFSFIHANT 
400
NISGSSNLGN IVFT
450