fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G25730 EDF3 ethylene response DNA binding factor 3 (.1)

>AT3G25730.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 166
HpaI GTT|AAC 688
SacI GAGCT|C 27, 221
XbaI T|CTAGA 876


Click here to view TAIR data

>AT3G25730.1 length:1002
ATGGATGCCA TGAGTAGCGT AGACGAGAGC TCTACAACTA CAGATTCCAT 
50
TCCGGCGAGA AAGTCATCGT CTCCGGCGAG TTTACTATAT AGAATGGGAA 
100
GCGGAACAAG CGTGGTACTT GATTCAGAGA ACGGTGTCGA AGTCGAAGTC 
150
GAAGCCGAAT CAAGAAAGCT TCCTTCTTCA AGATTCAAAG GTGTTGTTCC 
200
TCAACCAAAT GGAAGATGGG GAGCTCAGAT TTACGAGAAA CATCAACGCG 
250
TGTGGCTTGG TACTTTCAAC GAGGAAGACG AAGCAGCTCG TGCTTACGAC 
300
GTCGCGGCTC ACCGTTTCCG TGGCCGCGAT GCCGTTACTA ATTTCAAAGA 
350
CACGACGTTC GAAGAAGAGG TTGAGTTCTT AAACGCGCAT TCGAAATCAG 
400
AGATCGTAGA TATGTTGAGA AAACACACTT ACAAAGAAGA GTTAGACCAA 
450
AGGAAACGTA ACCGTGACGG TAACGGAAAA GAGACGACGG CGTTTGCTTT 
500
GGCTTCGATG GTGGTTATGA CGGGGTTTAA AACGGCGGAG TTACTGTTTG 
550
AGAAAACGGT AACGCCAAGT GACGTCGGGA AACTAAACCG TTTAGTTATA 
600
CCAAAACACC AAGCGGAGAA ACATTTTCCG TTACCGTTAG GTAATAATAA 
650
CGTCTCCGTT AAAGGTATGC TGTTGAATTT CGAAGACGTT AACGGGAAAG 
700
TGTGGAGGTT CCGTTACTCT TATTGGAATA GTAGTCAAAG TTATGTGTTG 
750
ACCAAAGGTT GGAGTAGATT CGTTAAAGAG AAGAGACTTT GTGCTGGTGA 
800
TTTGATCAGT TTTAAAAGAT CCAACGATCA AGATCAAAAA TTCTTTATCG 
850
GGTGGAAATC GAAATCCGGG TTGGATCTAG AGACGGGTCG GGTTATGAGA 
900
TTGTTTGGGG TTGATATTTC TTTAAACGCC GTCGTTGTAG TGAAGGAAAC 
950
AACGGAGGTG TTAATGTCGT CGTTAAGGTG TAAGAAGCAA CGAGTTTTGT 
1000
AA
1050

>AT3G25730.1 longest ORF length:333
MDAMSSVDES STTTDSIPAR KSSSPASLLY RMGSGTSVVL DSENGVEVEV 
50
EAESRKLPSS RFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD 
100
VAAHRFRGRD AVTNFKDTTF EEEVEFLNAH SKSEIVDMLR KHTYKEELDQ 
150
RKRNRDGNGK ETTAFALASM VVMTGFKTAE LLFEKTVTPS DVGKLNRLVI 
200
PKHQAEKHFP LPLGNNNVSV KGMLLNFEDV NGKVWRFRYS YWNSSQSYVL 
250
TKGWSRFVKE KRLCAGDLIS FKRSNDQDQK FFIGWKSKSG LDLETGRVMR 
300
LFGVDISLNA VVVVKETTEV LMSSLRCKKQ RVL
350